Gene: Sed0026219
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0026219
- Transcript Identifier Sed0026219.1
- Gene Type Coding gene
- Location LG10 : 2964748-2978282 : negative
Gene Family Information
- ID HOM05D002467
- #Genes/#Species 275/99
- Phylogenetic origin
- ID ORTHO05D002875
- #Genes/#Species 256/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0026219.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT2G17520 |
| GO:0034976 | ISO | PLAZA Integrative Orthology | response to endoplasmic reticulum stress | AT2G17520 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT2G17520 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT2G17520 |
| GO:0046777 | ISO | PLAZA Integrative Orthology | protein autophosphorylation | AT2G17520 |
| GO:0030968 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum unfolded protein response | AT2G17520 |
| GO:0006397 | IEA | InterPro | mRNA processing | |
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004521 | ISO | PLAZA Integrative Orthology | endoribonuclease activity | AT2G17520 |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0004540 | IEA | InterPro | ribonuclease activity | |
| GO:0004748 | IEA | InterPro | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G17520 |
| GO:0042406 | ISO | PLAZA Integrative Orthology | extrinsic component of endoplasmic reticulum membrane | AT2G17520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000719 | Protein kinase domain |
| IPR000788 | Ribonucleotide reductase large subunit, C-terminal |
| IPR039718 | Ribonucleoside-diphosphate reductase large subunit |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR013346 | Ribonucleotide reductase, class I , alpha subunit |
| IPR008926 | Ribonucleotide reductase R1 subunit, N-terminal |
| IPR013509 | Ribonucleotide reductase large subunit, N-terminal |
| IPR010513 | KEN domain |
| IPR005144 | ATP-cone domain |
| IPR038357 | KEN domain superfamily |
| Mapman id | Description |
|---|---|
| 18.4.12 | Protein modification.phosphorylation.bifunctional protein kinase and mRNA endoribonuclease (IRE) |
| 27.11.1.1 | Multi-process regulation.UPR (Unfolded Protein Response) signalling.IRE1-bZIP60 pathway.bifunctional protein kinase and ribonuclease (IRE1) |
| 6.3.1.1.1 | Nucleotide metabolism.deoxynucleotides.biosynthesis.ribonucleoside-diphosphate reductase heterodimer.large subunit |