Gene: Os06g0168600
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os06g0168600
- Transcript Identifier Os06t0168600-01
- Gene Type Coding gene
- Location chr06 : 3450100-3454489 : negative
Gene Family Information
- ID HOM05D002467
- #Genes/#Species 275/99
- Phylogenetic origin
- ID ORTHO05D003907
- #Genes/#Species 199/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os06t0168600-01
- MSU-ID LOC_Os06g07210.1
- symbol rnrl1
- symbol RNRL1
- symbol V3
- symbol v3
- name virescent 3
- name virescent-3
- name ribonucleotide reductase large subunit 1.
- name virescent3
- uniprot Q5VRF5
Descriptions
- Description Ribonucleotide reductase, Chloroplast biogenesis
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0009263 | IBA | GOA Database | deoxyribonucleotide biosynthetic process | |
| GO:0009202 | ISO | PLAZA Integrative Orthology | deoxyribonucleoside triphosphate biosynthetic process | AT2G21790 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G21790 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IBA IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004748 | IBA IEA | GOA Database | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | |
| GO:0004748 | IEA | InterPro | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005971 | IBA | GOA Database | ribonucleoside-diphosphate reductase complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000788 | Ribonucleotide reductase large subunit, C-terminal |
| IPR039718 | Ribonucleoside-diphosphate reductase large subunit |
| IPR013509 | Ribonucleotide reductase large subunit, N-terminal |
| IPR013346 | Ribonucleotide reductase, class I , alpha subunit |
| IPR005144 | ATP-cone domain |
| IPR008926 | Ribonucleotide reductase R1 subunit, N-terminal |
| Mapman id | Description |
|---|---|
| 6.3.1.1.1 | Nucleotide metabolism.deoxynucleotides.biosynthesis.ribonucleoside-diphosphate reductase heterodimer.large subunit |