Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26950 Brassica napus
A02p20300 Brassica napus
A07p03160 Brassica napus
A07p41420 Brassica napus
A09p44360 Brassica napus
Aa31LG4G19310 Aethionema arabicum
Aa31LG4G6050 Aethionema arabicum
Aa31LG8G15030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1273 Anthoceros agrestis
Actinidia03179 Actinidia chinensis
Actinidia15258 Actinidia chinensis
Actinidia17000 Actinidia chinensis
Actinidia17419 Actinidia chinensis
Actinidia22952 Actinidia chinensis
Ah.00g000330 Amaranthus hybridus
Ah.03g149150 Amaranthus hybridus
AL2G35860 Arabidopsis lyrata
AL3G50820 Arabidopsis lyrata
AL5G31730 Arabidopsis lyrata
Aqoxy1G03325 Aquilegia oxysepala
Aqoxy6G02171 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1NY0MW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2DB4EL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.386S4Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CN674D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FBLS0X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KX2KTU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LC7X94 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UHQ127 Arachis hypogaea
AT1G75850 Arabidopsis thaliana
AT2G17790 Arabidopsis thaliana
AT3G51310 Arabidopsis thaliana
ATR0716G055 Amborella trichopoda
Atru.chr13.255 Acer truncatum
Atru.chr3.862 Acer truncatum
AUR62003335 Chenopodium quinoa
AUR62026622 Chenopodium quinoa
AUR62029503 Chenopodium quinoa
AUR62040562 Chenopodium quinoa
AUR62041472 Chenopodium quinoa
BcaB01g00530 Brassica carinata
BcaB03g16551 Brassica carinata
BcaB05g24954 Brassica carinata
BcaC03g15631 Brassica carinata
BcaC03g15632 Brassica carinata
BcaC06g36323 Brassica carinata
BcaC08g47009 Brassica carinata
BcaC08g47010 Brassica carinata
BcaC08g47078 Brassica carinata
BcaC08g47319 Brassica carinata
BcaNung05393 Brassica carinata
BolC2t09345H Brassica oleracea
BolC6t40020H Brassica oleracea
BolC7t40939H Brassica oleracea
BolC8t50272H Brassica oleracea
BraA01t02830Z Brassica rapa
BraA02t07064Z Brassica rapa
BraA07t28112Z Brassica rapa
BraA07t31675Z Brassica rapa
BraA09t39896Z Brassica rapa
C02p33600 Brassica napus
C06p49820 Brassica napus
C07p05380 Brassica napus
C08p26590 Brassica napus
CAN.G116.8 Capsicum annuum
CAN.G1274.34 Capsicum annuum
CAN.G1616.5 Capsicum annuum
CAN.G1925.1 Capsicum annuum
CAN.G20.27 Capsicum annuum
CAN.G333.2 Capsicum annuum
CAN.G354.47 Capsicum annuum
CAN.G414.2 Capsicum annuum
CANSAT25G1690 Cannabis sativa
CARHR069400 Cardamine hirsuta
CARHR108210 Cardamine hirsuta
CARHR160890 Cardamine hirsuta
Carub.0002s2276 Capsella rubella
Carub.0003s3194 Capsella rubella
Carub.0005s1768 Capsella rubella
Ca_13422_v3 Cicer arietinum L.
Ca_13438_v3 Cicer arietinum L.
Ca_24923_v3 Cicer arietinum L.
Ca_31105_v3 Cicer arietinum L.
CBR_g41228 Chara braunii
Cc07_g11090 Coffea canephora
Cc10_g01430 Coffea canephora
CDE05G3567 Ceratophyllum demersum
Cfa007003 Carpinus fangiana
Cfa013979 Carpinus fangiana
Cfa026138 Carpinus fangiana
Ciclev10000335m.g Citrus clementina
Ciclev10024925m.g Citrus clementina
CiPaw.07G061300 Carya illinoinensis
CiPaw.08G067600 Carya illinoinensis
ClCG05G015560 Citrullus lanatus
ClCG10G000570 Citrullus lanatus
COL.COLO4_22465 Corchorus olitorius
COL.COLO4_26119 Corchorus olitorius
Cpa.g.sc26.302 Carica papaya
Cpa.g.sc6.289 Carica papaya
Cre01.g029650 Chlamydomonas reinhardtii
CsaV3_3G000650 Cucumis sativus L.
CsaV3_3G045990 Cucumis sativus L.
CSS0017701 Camellia sinensis var. sinensis
CSS0029031 Camellia sinensis var. sinensis
CSS0032290 Camellia sinensis var. sinensis
CSS0042556 Camellia sinensis var. sinensis
DCAR_009497 Daucus carota
DCAR_011606 Daucus carota
Dinv31868 Davidia involucrata
Dinv31869 Davidia involucrata
Dinv33654 Davidia involucrata
Dinv40119 Davidia involucrata
Duzib093G0283 Durio zibethinus
Duzib116G0321 Durio zibethinus
Duzib147G1566 Durio zibethinus
ECA232G1756 Erigeron canadensis
ECA246G2517 Erigeron canadensis
EL10Ac1g02159 Beta vulgaris
EL10Ac6g15520 Beta vulgaris
Eucgr.H00957 Eucalyptus grandis
Eucgr.I02329 Eucalyptus grandis
FAN15G1281 Fragaria x ananassa
FAN19G2887 Fragaria x ananassa
FAN20G2109 Fragaria x ananassa
FAN23G0679 Fragaria x ananassa
FAN23G0707 Fragaria x ananassa
FAN26G1734 Fragaria x ananassa
FAN27G1074 Fragaria x ananassa
FAN28G0319 Fragaria x ananassa
FvH4_1g11410 Fragaria vesca
FvH4_2g38180 Fragaria vesca
Glyma.01G164100 Glycine max
Glyma.11G079200 Glycine max
Glyma.14G220300 Glycine max
Glyma.17G259200 Glycine max
Gohir.A01G110300 Gossypium hirsutum
Gohir.A05G185100 Gossypium hirsutum
Gohir.A11G042600 Gossypium hirsutum
Gohir.D01G096900 Gossypium hirsutum
Gohir.D04G102250 Gossypium hirsutum
Gohir.D05G187900 Gossypium hirsutum
Gohir.D05G267133 Gossypium hirsutum
Gohir.D11G046100 Gossypium hirsutum
Gohir.D11G144800 Gossypium hirsutum
Gorai.002G122600 Gossypium raimondii
Gorai.007G049400 Gossypium raimondii
Gorai.009G193200 Gossypium raimondii
Gorai.N009400 Gossypium raimondii
GSVIVG01009948001 Vitis vinifera
GSVIVG01018728001 Vitis vinifera
HanXRQChr01g0020431 Helianthus annuus
HanXRQChr07g0205801 Helianthus annuus
HanXRQChr09g0268681 Helianthus annuus
HanXRQChr11g0322091 Helianthus annuus
HanXRQChr15g0483861 Helianthus annuus
Haze_03729 Corylus avellana
Haze_22665 Corylus avellana
Haze_26419 Corylus avellana
HPP92_015858 Vanilla planifolia
HPP92_015864 Vanilla planifolia
Hund05160 Selenicereus undatus
Hund05173 Selenicereus undatus
Hund16505 Selenicereus undatus
Lalb_Chr03g0033441 Lupinus albus
Lalb_Chr05g0212241 Lupinus albus
Lalb_Chr09g0321591 Lupinus albus
Lj2g0024960 Lotus japonicus
Lj4A21G61 Lonicera japonica
Lj4A222T55 Lonicera japonica
Lj5g0023508 Lotus japonicus
Lj8A599T21 Lonicera japonica
Lsat_1_v5_gn_0_1260 Lactuca sativa
Lsat_1_v5_gn_3_72040 Lactuca sativa
Lsat_1_v5_gn_4_135361 Lactuca sativa
Manes.01G148800 Manihot esculenta
Manes.02G107500 Manihot esculenta
Manes.18G011700 Manihot esculenta
Mapoly0149s0009 Marchantia polymorpha
MBI08_g01796_MAGBIO Magnolia biondii
MBI08_g20556_MAGBIO Magnolia biondii
MBI09_g15772_MAGBIO Magnolia biondii
MBI14_g03618_MAGBIO Magnolia biondii
MBI17_g12238_MAGBIO Magnolia biondii
MBI18_g01971_MAGBIO Magnolia biondii
MCO11G484 Micromonas commoda
MD02G1126400 Malus domestica
MD15G1010200 Malus domestica
MD15G1242400 Malus domestica
Medtr1g025610 Medicago truncatula
Medtr5g022610 Medicago truncatula
MELO3C003740.2 Cucumis melo
MELO3C013753.2 Cucumis melo
Migut.C00861 Erythranthe guttata
Migut.H02181 Erythranthe guttata
MSTRG.2731 Avicennia marina
Nitab4.5_0000192g0160 Nicotiana tabacum
Nitab4.5_0001685g0070 Nicotiana tabacum
Nitab4.5_0001892g0120 Nicotiana tabacum
Nitab4.5_0001944g0040 Nicotiana tabacum
Nitab4.5_0007831g0020 Nicotiana tabacum
Nitab4.5_0008943g0010 Nicotiana tabacum
Nn5g30778 Nelumbo nucifera
Nn6g31995 Nelumbo nucifera
Nn7g37523 Nelumbo nucifera
Oeu007363.1 Olea europaea
Oeu007364.1 Olea europaea
Oeu048474.1 Olea europaea
Os03g0801600 Oryza sativa ssp. japonica
Peaxi162Scf00064g00736 Petunia axillaris
Peaxi162Scf00635g00716 Petunia axillaris
PGR119G0571 Punica granatum
PGSC0003DMG400003648 Solanum tuberosum
PGSC0003DMG400022528 Solanum tuberosum
PGSC0003DMG400029334 Solanum tuberosum
Phvul.001G006000 Phaseolus vulgaris
Phvul.002G106500 Phaseolus vulgaris
Potri.002G019400 Populus trichocarpa
Potri.005G110600 Populus trichocarpa
Potri.005G242100 Populus trichocarpa
Potri.007G061520 Populus trichocarpa
Pp3c17_12510 Physcomitrium patens
Pp3c2_30900 Physcomitrium patens
PRCOL_00003787 Prasinoderma coloniale
Prupe.1G362700 Prunus persica
Prupe.7G171800 Prunus persica
Psat0s1256g0040 Pisum sativum
Psat2g153040 Pisum sativum
Psat6g003320 Pisum sativum
PSO541G0184 Papaver somniferum
PSO675G7018 Papaver somniferum
QL02p012192 Quercus lobata
QL04p095224 Quercus lobata
QL06p051112 Quercus lobata
RcHm_v2.0_Chr2g0098981 Rosa chinensis
RcHm_v2.0_Chr6g0303301 Rosa chinensis
Rhsim06G0018700 Rhododendron simsii
Rhsim10G0209100 Rhododendron simsii
Sabra02G0015700 Salix brachista
Sabra05G0090700 Salix brachista
Sabra05G0187400 Salix brachista
SalBow3G1072 Salvia bowleyana
SalBow3G3911 Salvia bowleyana
SalBow7G0293 Salvia bowleyana
SalBow7G3851 Salvia bowleyana
SalBow8G3606 Salvia bowleyana
Sc02g0008620 Simmondsia chinensis
Sc03g0003680 Simmondsia chinensis
Sed0010944 Sechium edule
Sed0026499 Sechium edule
SGA_v2.0_scaffold108G30998 Striga asiatica
SGA_v2.0_scaffold2G00970 Striga asiatica
SHI08540 Sapria himalayana
SHI08543 Sapria himalayana
SMO351G0332 Selaginella moellendorffii
Solyc02g083560.3 Solanum lycopersicum
Solyc03g033400.4 Solanum lycopersicum
Solyc12g089340.2 Solanum lycopersicum
Sopen02g028340 Solanum pennellii
Sopen03g006170 Solanum pennellii
Sopen12g031200 Solanum pennellii
Sp3g31200 Schrenkiella parvula
Sp5g10920 Schrenkiella parvula
Sp5g30990 Schrenkiella parvula
TAR381G1329 Trochodendron aralioides
TAR625G0873 Trochodendron aralioides
THA.LOC104800037 Tarenaya hassleriana
THA.LOC104804271 Tarenaya hassleriana
THA.LOC104813783 Tarenaya hassleriana
Thecc.01G014300 Theobroma cacao
Thecc.08G047700 Theobroma cacao
Thhalv10010136m.g Eutrema salsugineum
Thhalv10018141m.g Eutrema salsugineum
Thhalv10022565m.g Eutrema salsugineum
TPR.G10523 Trifolium pratense
TPR.G14386 Trifolium pratense
TPR.G26384 Trifolium pratense
TWI09G1520 Tripterygium wilfordii
TWI56G0516 Tripterygium wilfordii
TWI73G0268 Tripterygium wilfordii
unitig_699.g19682 Utricularia gibba
unitig_747.g21527 Utricularia gibba
vmacro07571 Vaccinium macrocarpon
vmacro22195 Vaccinium macrocarpon
vmacro23196 Vaccinium macrocarpon
VMungo0647G0608 Vigna mungo
VMungo1215G0913 Vigna mungo
Zm00001eb061190 Zea mays
Zm00001eb212740 Zea mays

User provided reference genes

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