Gene: Sopen02g028340

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g028340
  • Transcript Identifier Sopen02g028340.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 50849769-50858492 : positive

Gene Family Information

  • ID HOM05D002344
  • #Genes/#Species 289/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g028340.1

Descriptions

  • Description VPS35 homolog B (VPS35B) | CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 | BEST Arabidopsis thaliana protein match is: VPS35 homolog A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
InterProprotein transport
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi
GO:0006886
ISO
PLAZA Integrative Orthologyintracellular protein transport AT2G17790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G17790

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030906
IEA
InterProretromer, cargo-selective complex
GO:0043231
ISO
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT3G51310
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT3G51310
GO:0030904
ISO
PLAZA Integrative Orthologyretromer complex AT3G51310
GO:0010008
ISO
PLAZA Integrative Orthologyendosome membrane AT2G17790
GO:0005771
ISO
PLAZA Integrative Orthologymultivesicular body AT3G51310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005378 Vacuolar protein sorting-associated protein 35
IPR016024 Armadillo-type fold
IPR042491 Vacuolar protein sorting-associated protein 35, C-terminal
Mapman id Description
22.4.2.1.1 Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS35