Gene: Cre01.g029650
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre01.g029650
- Transcript Identifier Cre01.g029650.t1.1
- Gene Type Coding gene
- Location chromosome_1 : 4379219-4387655 : negative
Gene Family Information
- ID HOM05D002344
- #Genes/#Species 289/98
- Phylogenetic origin
- ID ORTHO05D002954
- #Genes/#Species 252/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre01.g029650.v5.5
- pacid 30789513
- alias g674.t1
- geneName VPS35
- uniprot A8HQF0
Descriptions
- Description Subunit of Retromer complex
- Description Expressed Protein. Similar to VPS35, a component of the Retromer Coat complex involved in endosomal to Golgi trafficking; may still need editing at 3' end due to sequence gap.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0015031 | IEA | InterPro | protein transport | |
| GO:0042147 | IEA | GOA Database | retrograde transport, endosome to Golgi | |
| GO:0042147 | IEA | InterPro | retrograde transport, endosome to Golgi | |
| GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | AT2G17790 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G17790 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0030906 | IEA | GOA Database | retromer, cargo-selective complex | |
| GO:0030906 | IEA | InterPro | retromer, cargo-selective complex | |
| GO:0043231 | ISO | PLAZA Integrative Orthology | intracellular membrane-bounded organelle | AT3G51310 |
| GO:0030904 | ISO | PLAZA Integrative Orthology | retromer complex | AT3G51310 |
| GO:0010008 | ISO | PLAZA Integrative Orthology | endosome membrane | AT2G17790 |
| GO:0005771 | ISO | PLAZA Integrative Orthology | multivesicular body | AT3G51310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.4.2.1.1 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS35 |