Gene: Carub.0005s1768

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s1768
  • Transcript Identifier Carub.0005s1768.1
  • Gene Type Coding gene
  • Location scaffold_5 : 9152832-9157442 : negative

Gene Family Information

  • ID HOM05D002344
  • #Genes/#Species 289/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s1768.v1.1
  • pacid 39224885
  • synonym Carubv10018751m.g

Descriptions

  • Description K18468 - vacuolar protein sorting-associated protein 35 (VPS35)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
InterProprotein transport
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030906
IEA
InterProretromer, cargo-selective complex
GO:0043231
ISO
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT3G51310
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT3G51310
GO:0030904
ISO
PLAZA Integrative Orthologyretromer complex AT3G51310
GO:0005771
ISO
PLAZA Integrative Orthologymultivesicular body AT3G51310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005378 Vacuolar protein sorting-associated protein 35
IPR042491 Vacuolar protein sorting-associated protein 35, C-terminal
Mapman id Description
22.4.2.1.1 Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS35