Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p19700 Brassica napus
A05p37270 Brassica napus
A08p02920 Brassica napus
A08p02940 Brassica napus
Aa31LG10G3500 Aethionema arabicum
Aa31sc172G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2875 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis
Actinidia06337 Actinidia chinensis
Actinidia16328 Actinidia chinensis
Actinidia23968 Actinidia chinensis
Actinidia26437 Actinidia chinensis
Actinidia26439 Actinidia chinensis
Ah.04g161910 Amaranthus hybridus
Ah.06g194290 Amaranthus hybridus
AL1G59110 Arabidopsis lyrata
AL3G23710 Arabidopsis lyrata
Aqoxy1G00257 Aquilegia oxysepala
Aqoxy1G00300 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0B1337 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.343DA6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DNZ7SI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HT7K3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I6T88V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8SGVJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TAE4IP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UGJV9R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y5NGSN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YF2A1U Arachis hypogaea
AT1G51310 Arabidopsis thaliana
AT3G12080 Arabidopsis thaliana
ATR0605G089 Amborella trichopoda
ATR0605G248 Amborella trichopoda
Atru.chr3.2733 Acer truncatum
Atru.chr3.2734 Acer truncatum
AUR62000114 Chenopodium quinoa
AUR62019293 Chenopodium quinoa
AUR62019294 Chenopodium quinoa
BcaB02g11023 Brassica carinata
BcaB02g11231 Brassica carinata
BcaB04g17220 Brassica carinata
BcaB06g25547 Brassica carinata
BcaB08g35090 Brassica carinata
BcaB08g35093 Brassica carinata
BcaC01g01260 Brassica carinata
BcaC01g01262 Brassica carinata
BcaC05g27353 Brassica carinata
BcaC05g29292 Brassica carinata
BcaNung06701 Brassica carinata
BolC1t05267H Brassica oleracea
BolC2t12207H Brassica oleracea
BolC3t21311H Brassica oleracea
BolC3t21313H Brassica oleracea
BolC3t21314H Brassica oleracea
BolC5t32017H Brassica oleracea
BolC5t34241H Brassica oleracea
BraA01t04141Z Brassica rapa
BraA05t20874Z Brassica rapa
BraA05t22523Z Brassica rapa
BraA08t32327Z Brassica rapa
C02p10780 Brassica napus
C03p89920 Brassica napus
C03p89940 Brassica napus
C03p89950 Brassica napus
C05p32860 Brassica napus
C05p55740 Brassica napus
CAN.G599.8 Capsicum annuum
CAN.G956.10 Capsicum annuum
CARHR041380 Cardamine hirsuta
CARHR086640 Cardamine hirsuta
Carub.0001s4017 Capsella rubella
Carub.0003s1142 Capsella rubella
Carub.0008s0647 Capsella rubella
Ca_11284_v3 Cicer arietinum L.
Ca_11285_v3 Cicer arietinum L.
Ca_30226_v3 Cicer arietinum L.
Ca_30227_v3 Cicer arietinum L.
CBR_g19922 Chara braunii
CBR_g20109 Chara braunii
CBR_g40742 Chara braunii
Cc07_g19630 Coffea canephora
Cc09_g04150 Coffea canephora
CDE04G2511 Ceratophyllum demersum
CDE10G0602 Ceratophyllum demersum
Cfa007194 Carpinus fangiana
Cfa009764 Carpinus fangiana
Ciclev10006706m.g Citrus clementina
Ciclev10014514m.g Citrus clementina
CiPaw.13G161600 Carya illinoinensis
CiPaw.14G119300 Carya illinoinensis
ClCG02G023280 Citrullus lanatus
ClCG02G023290 Citrullus lanatus
COL.COLO4_24897 Corchorus olitorius
Cpa.g.sc84.62 Carica papaya
Cpa.g.sc84.63 Carica papaya
Cre14.g628000 Chlamydomonas reinhardtii
Cre16.g658450 Chlamydomonas reinhardtii
Cre16.g658526 Chlamydomonas reinhardtii
CsaV3_4G024210 Cucumis sativus L.
CsaV3_4G024220 Cucumis sativus L.
CSS0000345 Camellia sinensis var. sinensis
CSS0013347 Camellia sinensis var. sinensis
CSS0030566 Camellia sinensis var. sinensis
CSS0030827 Camellia sinensis var. sinensis
CSS0037797 Camellia sinensis var. sinensis
DCAR_000723 Daucus carota
DCAR_029948 Daucus carota
Dinv22182 Davidia involucrata
Dinv22183 Davidia involucrata
Duzib150G1137 Durio zibethinus
Duzib168G2040 Durio zibethinus
Duzib170G0271 Durio zibethinus
ECA233G1364 Erigeron canadensis
ECA238G2081 Erigeron canadensis
EL10Ac4g10259 Beta vulgaris
EL10Ac4g10260 Beta vulgaris
EL10Ac4g10275 Beta vulgaris
EL10Ac4g10276 Beta vulgaris
Eucgr.B03681 Eucalyptus grandis
Eucgr.J00770 Eucalyptus grandis
FAN04G1610 Fragaria x ananassa
FAN08G3580 Fragaria x ananassa
FAN18G3947 Fragaria x ananassa
FAN19G0796 Fragaria x ananassa
FAN23G0767 Fragaria x ananassa
FAN26G2056 Fragaria x ananassa
FAN28G1431 Fragaria x ananassa
FAN28G1477 Fragaria x ananassa
FvH4_1g30400 Fragaria vesca
FvH4_5g33050 Fragaria vesca
Glyma.11G133367 Glycine max
Glyma.11G133433 Glycine max
Glyma.11G133500 Glycine max
Glyma.11G176315 Glycine max
Glyma.12G057600 Glycine max
Glyma.12G057700 Glycine max
Gohir.A05G069100 Gossypium hirsutum
Gohir.A08G013840 Gossypium hirsutum
Gohir.D05G072000 Gossypium hirsutum
Gohir.D08G024300 Gossypium hirsutum
Gorai.004G019700 Gossypium raimondii
Gorai.009G073000 Gossypium raimondii
GSVIVG01025274001 Vitis vinifera
GSVIVG01025275001 Vitis vinifera
HanXRQChr07g0197481 Helianthus annuus
HanXRQChr07g0206341 Helianthus annuus
Haze_23129 Corylus avellana
Haze_23130 Corylus avellana
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla
Hma1.2p1_1315F.1_g275160 Hydrangea macrophylla
HPP92_009580 Vanilla planifolia
HPP92_014272 Vanilla planifolia
HPP92_024482 Vanilla planifolia
Hund07516 Selenicereus undatus
Hund22033 Selenicereus undatus
Lalb_Chr03g0026321 Lupinus albus
Lalb_Chr19g0138111 Lupinus albus
Lj1C332G7 Lonicera japonica
Lj2A631G13 Lonicera japonica
Lj3g0006923 Lotus japonicus
Lj3g0007359 Lotus japonicus
Lsat_1_v5_gn_1_117501 Lactuca sativa
Lsat_1_v5_gn_2_132680 Lactuca sativa
Lsat_1_v5_gn_2_97721 Lactuca sativa
Lsat_1_v5_gn_6_47501 Lactuca sativa
Manes.06G165000 Manihot esculenta
Manes.06G165100 Manihot esculenta
Mapoly0010s0199 Marchantia polymorpha
Mapoly0022s0147 Marchantia polymorpha
Mapoly0129s0019 Marchantia polymorpha
MBI04_g17077_MAGBIO Magnolia biondii
MCO02G416 Micromonas commoda
MCO02G480 Micromonas commoda
MCO12G105 Micromonas commoda
MD03G1176400 Malus domestica
MD03G1176500 Malus domestica
MD11G1196700 Malus domestica
MD11G1197100 Malus domestica
Medtr4g065023 Medicago truncatula
Medtr4g065030 Medicago truncatula
MELO3C014598.2 Cucumis melo
MELO3C014599.2 Cucumis melo
MELO3C029180.2 Cucumis melo
MELO3C032733.2 Cucumis melo
MELO3C035704.2 Cucumis melo
Migut.N02312 Erythranthe guttata
Migut.N02313 Erythranthe guttata
MSTRG.17589 Avicennia marina
MSTRG.17590 Avicennia marina
Nitab4.5_0005819g0060 Nicotiana tabacum
Nitab4.5_0005819g0070 Nicotiana tabacum
Nitab4.5_0006994g0050 Nicotiana tabacum
Nitab4.5_0006994g0060 Nicotiana tabacum
Nn3g21873 Nelumbo nucifera
Nn7g36125 Nelumbo nucifera
Nn7g36127 Nelumbo nucifera
Oeu043297.4 Olea europaea
Oeu063320.1 Olea europaea
Os03g0174600 Oryza sativa ssp. japonica
Os11g0638000 Oryza sativa ssp. japonica
Peaxi162Scf00004g00224 Petunia axillaris
Peaxi162Scf00004g02222 Petunia axillaris
PGR102G0832 Punica granatum
PGSC0003DMG400003844 Solanum tuberosum
Phvul.011G059500 Phaseolus vulgaris
Phvul.011G059600 Phaseolus vulgaris
Potri.001G259000 Populus trichocarpa
Potri.009G054200 Populus trichocarpa
Pp3c11_19380 Physcomitrium patens
Pp3c15_1840 Physcomitrium patens
Pp3c4_6690 Physcomitrium patens
PRCOL_00000933 Prasinoderma coloniale
PRCOL_00001138 Prasinoderma coloniale
PRCOL_00001597 Prasinoderma coloniale
Prupe.4G246800 Prunus persica
Prupe.4G247000 Prunus persica
Prupe.4G247300 Prunus persica
Prupe.5G028600 Prunus persica
Psat7g212760 Pisum sativum
Psat7g212800 Pisum sativum
PSO339G2962 Papaver somniferum
PSO339G2995 Papaver somniferum
PSO384G3396 Papaver somniferum
PSO384G3976 Papaver somniferum
QL01p004788 Quercus lobata
QL01p004794 Quercus lobata
QL01p004799 Quercus lobata
QL01p024830 Quercus lobata
QL06p038470 Quercus lobata
QL06p040831 Quercus lobata
QL11p018105 Quercus lobata
QL11p055566 Quercus lobata
QL12p030809 Quercus lobata
RcHm_v2.0_Chr1g0369811 Rosa chinensis
RcHm_v2.0_Chr3g0490621 Rosa chinensis
RcHm_v2.0_Chr7g0231131 Rosa chinensis
Rhsim01G0191500 Rhododendron simsii
Rhsim13G0221900 Rhododendron simsii
Sabra09G0039500 Salix brachista
Sabra16G0158600 Salix brachista
SalBow5G0100 Salvia bowleyana
SalBow5G1866 Salvia bowleyana
SalBow5G2412 Salvia bowleyana
SalBow5G3318 Salvia bowleyana
SalBow5G4732 Salvia bowleyana
Sc06g0006280 Simmondsia chinensis
Sc06g0006620 Simmondsia chinensis
Sc16g0011510 Simmondsia chinensis
Sed0009485 Sechium edule
Sed0017829 Sechium edule
SEGI_07269 Sequoiadendron giganteum
SEGI_13867 Sequoiadendron giganteum
SEGI_19193 Sequoiadendron giganteum
SEGI_22266 Sequoiadendron giganteum
SEGI_39418 Sequoiadendron giganteum
SGA_v2.0_scaffold42G16104 Striga asiatica
SGA_v2.0_scaffold42G16106 Striga asiatica
SMO271G0063 Selaginella moellendorffii
SMO331G0070 Selaginella moellendorffii
Solyc09g074100.4 Solanum lycopersicum
Solyc11g065870.3 Solanum lycopersicum
Sopen09g028920 Solanum pennellii
Sopen11g025600 Solanum pennellii
Sp1g37990 Schrenkiella parvula
Sp3g10310 Schrenkiella parvula
TAR369G0718 Trochodendron aralioides
TAR623G0947 Trochodendron aralioides
THA.LOC104799102 Tarenaya hassleriana
Thecc.09G232500 Theobroma cacao
Thecc.09G232700 Theobroma cacao
Thhalv10011432m.g Eutrema salsugineum
Thhalv10020226m.g Eutrema salsugineum
TPR.G23223 Trifolium pratense
TPR.G35024 Trifolium pratense
TPR.G35035 Trifolium pratense
TWI60G0297 Tripterygium wilfordii
TWI60G0961 Tripterygium wilfordii
unitig_21.g20901 Utricularia gibba
unitig_21.g20902 Utricularia gibba
unitig_699.g19128 Utricularia gibba
vmacro04210 Vaccinium macrocarpon
vmacro04211 Vaccinium macrocarpon
vmacro04212 Vaccinium macrocarpon
vmacro04213 Vaccinium macrocarpon
vmacro19340 Vaccinium macrocarpon
VMungo1127G0743 Vigna mungo
Zm00001eb005670 Zea mays
Zm00001eb115290 Zea mays

User provided reference genes

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