Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09010 Brassica napus
A03p04590 Brassica napus
A03p58560 Brassica napus
A03p58620 Brassica napus
Aa31LG5G18570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3755 Anthoceros agrestis
Actinidia09172 Actinidia chinensis
Actinidia12366 Actinidia chinensis
Actinidia19405 Actinidia chinensis
Actinidia28316 Actinidia chinensis
Actinidia31075 Actinidia chinensis
Actinidia31076 Actinidia chinensis
Ah.02g117940 Amaranthus hybridus
Ah.02g122490 Amaranthus hybridus
Ah.06g183060 Amaranthus hybridus
Ah.10g038760 Amaranthus hybridus
AL3G19320 Arabidopsis lyrata
AL3G19410 Arabidopsis lyrata
AL3G38880 Arabidopsis lyrata
AL6G46570 Arabidopsis lyrata
AL7G27330 Arabidopsis lyrata
AL8G14170 Arabidopsis lyrata
AL8G27570 Arabidopsis lyrata
Aqoxy2G00154 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ES5MTE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea
AT2G13720 Arabidopsis thaliana
AT3G23890 Arabidopsis thaliana
AT5G53960 Arabidopsis thaliana
ATR0332G038 Amborella trichopoda
Atru.chr11.2587 Acer truncatum
AUR62009398 Chenopodium quinoa
AUR62023080 Chenopodium quinoa
BcaB01g05526 Brassica carinata
BcaB01g05530 Brassica carinata
BcaC04g23748 Brassica carinata
BcaC04g23749 Brassica carinata
BcaC05g29614 Brassica carinata
BcaC05g30482 Brassica carinata
BcaC06g32735 Brassica carinata
BcaC09g51672 Brassica carinata
BcaNung00438 Brassica carinata
BcaNung00439 Brassica carinata
BcaNung01342 Brassica carinata
BolC1t01018H Brassica oleracea
BolC3t13035H Brassica oleracea
BolC5t34561H Brassica oleracea
BolC5t34564H Brassica oleracea
BraA01t00849Z Brassica rapa
BraA03t14916Z Brassica rapa
BraA03t14922Z Brassica rapa
C01p10550 Brassica napus
C03p05140 Brassica napus
C03p05160 Brassica napus
C03p05180 Brassica napus
C05p59090 Brassica napus
C08p33680 Brassica napus
CAN.G219.44 Capsicum annuum
CANSAT80G1724 Cannabis sativa
CARHR061100 Cardamine hirsuta
CARHR061110 Cardamine hirsuta
Carub.0003s2419 Capsella rubella
Carub.0008s0790 Capsella rubella
Ca_14467_v3 Cicer arietinum L.
Ca_29227_v3 Cicer arietinum L.
CBR_g55332 Chara braunii
Cc02_g28170 Coffea canephora
CDE10G0015 Ceratophyllum demersum
Cfa010797 Carpinus fangiana
Ciclev10030505m.g Citrus clementina
CiPaw.05G149100 Carya illinoinensis
CiPaw.14G001600 Carya illinoinensis
CiPaw.14G099000 Carya illinoinensis
CiPaw.14G099100 Carya illinoinensis
ClCG10G012270 Citrullus lanatus
COL.COLO4_02379 Corchorus olitorius
COL.COLO4_15049 Corchorus olitorius
COL.COLO4_15050 Corchorus olitorius
COL.COLO4_16490 Corchorus olitorius
COL.COLO4_28234 Corchorus olitorius
Cpa.g.sc125.26 Carica papaya
Cre01.g009250 Chlamydomonas reinhardtii
CsaV3_3G032050 Cucumis sativus L.
CSS0021570 Camellia sinensis var. sinensis
CSS0033402 Camellia sinensis var. sinensis
DCAR_022381 Daucus carota
DCAR_029448 Daucus carota
DCAR_029449 Daucus carota
Dinv43424 Davidia involucrata
Duzib106G1002 Durio zibethinus
ECA248G0809 Erigeron canadensis
EL10Ac2g04344 Beta vulgaris
EL10As2g23258 Beta vulgaris
EL10As2g23282 Beta vulgaris
Eucgr.H02633 Eucalyptus grandis
Eucgr.H02748 Eucalyptus grandis
FAN01G0038 Fragaria x ananassa
FAN01G1372 Fragaria x ananassa
FAN03G0380 Fragaria x ananassa
FAN05G0547 Fragaria x ananassa
FAN05G1023 Fragaria x ananassa
FAN06G0127 Fragaria x ananassa
FAN09G0839 Fragaria x ananassa
FAN09G4539 Fragaria x ananassa
FAN10G1377 Fragaria x ananassa
FAN13G3028 Fragaria x ananassa
FAN21G0405 Fragaria x ananassa
FAN25G0983 Fragaria x ananassa
FAN26G0899 Fragaria x ananassa
FAN26G1597 Fragaria x ananassa
FvH4_3g01730 Fragaria vesca
FvH4_7g01280 Fragaria vesca
Glyma.10G090000 Glycine max
Glyma.15G276000 Glycine max
Gohir.A10G219600 Gossypium hirsutum
Gohir.D10G229100 Gossypium hirsutum
Gorai.011G261600 Gossypium raimondii
GSVIVG01032138001 Vitis vinifera
HanXRQChr01g0016471 Helianthus annuus
HanXRQChr14g0447821 Helianthus annuus
Haze_03174 Corylus avellana
Hma1.2p1_0214F.1_g090820 Hydrangea macrophylla
Hma1.2p1_0326F.1_g126200 Hydrangea macrophylla
Hma1.2p1_0326F.1_g126210 Hydrangea macrophylla
Hma1.2p1_0570F.1_g180510 Hydrangea macrophylla
Hma1.2p1_1755F.1_g300970 Hydrangea macrophylla
Hma1.2p1_1755F.1_g300980 Hydrangea macrophylla
Hma1.2p1_2118F.1_g314330 Hydrangea macrophylla
Hma1.2p1_2160F.1_g315570 Hydrangea macrophylla
Hma1.2p1_2160F.1_g315580 Hydrangea macrophylla
Hma1.2p1_2160F.1_g315590 Hydrangea macrophylla
Hma1.2p1_2332F.1_g320120 Hydrangea macrophylla
HPP92_014707 Vanilla planifolia
Hund15422 Selenicereus undatus
Lalb_Chr19g0140281 Lupinus albus
Lj1g0019754 Lotus japonicus
Lj2C383G13 Lonicera japonica
Lj3g0016100 Lotus japonicus
Lj4A282G40 Lonicera japonica
Lj4A282T39 Lonicera japonica
Lj4A284T34 Lonicera japonica
Lj4A285T22 Lonicera japonica
Lj4g0004129 Lotus japonicus
Lj4g0010623 Lotus japonicus
Lj9C634T13 Lonicera japonica
Lsat_1_v5_gn_1_105720 Lactuca sativa
Lsat_1_v5_gn_5_88760 Lactuca sativa
Lsat_1_v5_gn_6_66560 Lactuca sativa
Manes.10G140100 Manihot esculenta
Mapoly0050s0134 Marchantia polymorpha
MBI02_g23141_MAGBIO Magnolia biondii
MBI02_g23142_MAGBIO Magnolia biondii
MBI05_g27107_MAGBIO Magnolia biondii
MCO05G739 Micromonas commoda
MD01G1165800 Malus domestica
MD02G1308000 Malus domestica
MD07G1017700 Malus domestica
MD09G1237200 Malus domestica
MD11G1007100 Malus domestica
Medtr0756s0010 Medicago truncatula
Medtr1g051315 Medicago truncatula
Medtr1g075370 Medicago truncatula
Medtr2g032010 Medicago truncatula
Medtr2g032020 Medicago truncatula
Medtr2g101930 Medicago truncatula
Medtr3g031040 Medicago truncatula
Medtr3g085840 Medicago truncatula
Medtr6g029500 Medicago truncatula
Medtr6g029520 Medicago truncatula
Medtr8g447140 Medicago truncatula
MELO3C023986.2 Cucumis melo
Migut.B01281 Erythranthe guttata
MSTRG.20571 Avicennia marina
Nitab4.5_0000707g0240 Nicotiana tabacum
Nitab4.5_0002918g0080 Nicotiana tabacum
Nn1g07152 Nelumbo nucifera
Nn2g15271 Nelumbo nucifera
Nn7g36257 Nelumbo nucifera
Nn7g36258 Nelumbo nucifera
Oeu049004.1 Olea europaea
Oeu049493.1 Olea europaea
Os01g0234200 Oryza sativa ssp. japonica
Os02g0699700 Oryza sativa ssp. japonica
Peaxi162Scf00744g00349 Petunia axillaris
PGR031G1196 Punica granatum
PGSC0003DMG400006793 Solanum tuberosum
Phvul.005G024200 Phaseolus vulgaris
Potri.001G264000 Populus trichocarpa
Potri.009G058900 Populus trichocarpa
Pp3c18_20260 Physcomitrium patens
Pp3c18_20261 Physcomitrium patens
Pp3c19_3610 Physcomitrium patens
Pp3c22_6510 Physcomitrium patens
PRCOL_00004802 Prasinoderma coloniale
Prupe.2G017500 Prunus persica
Prupe.2G018500 Prunus persica
Psat0s2398g0120 Pisum sativum
Psat0s797g0200 Pisum sativum
Psat0s825g0040 Pisum sativum
Psat7g085320 Pisum sativum
PSO063G6561 Papaver somniferum
PSO832G4242 Papaver somniferum
QL02p043717 Quercus lobata
QL02p048481 Quercus lobata
QL02p053675 Quercus lobata
QL02p053676 Quercus lobata
QL04p008050 Quercus lobata
QL04p008053 Quercus lobata
QL04p008074 Quercus lobata
QL04p008574 Quercus lobata
QL04p008589 Quercus lobata
QL04p008683 Quercus lobata
QL04p008686 Quercus lobata
QL05p088556 Quercus lobata
QL08p003462 Quercus lobata
QL08p003465 Quercus lobata
QL08p021041 Quercus lobata
QL08p031651 Quercus lobata
QL08p037214 Quercus lobata
QL09p040356 Quercus lobata
QL10p065355 Quercus lobata
QL93p2009_0025 Quercus lobata
RcHm_v2.0_Chr1g0317031 Rosa chinensis
RcHm_v2.0_Chr1g0375001 Rosa chinensis
RcHm_v2.0_Chr1g0380651 Rosa chinensis
RcHm_v2.0_Chr1g0380661 Rosa chinensis
Rhsim01G0127100 Rhododendron simsii
Rhsim01G0128300 Rhododendron simsii
Rhsim07G0089300 Rhododendron simsii
Rhsim09G0080900 Rhododendron simsii
Rhsim09G0081000 Rhododendron simsii
RhsimUnG0044300 Rhododendron simsii
Sabra09G0043200 Salix brachista
Sabra09G0043300 Salix brachista
Sabra16G0162200 Salix brachista
SalBow5G1665 Salvia bowleyana
Sc11g0009090 Simmondsia chinensis
Sc16g0001930 Simmondsia chinensis
Sed0003769 Sechium edule
Sed0008745 Sechium edule
Sed0015505 Sechium edule
Sed0023112 Sechium edule
Sed0024297 Sechium edule
SEGI_10251 Sequoiadendron giganteum
SEGI_12910 Sequoiadendron giganteum
SEGI_12928 Sequoiadendron giganteum
SEGI_14036 Sequoiadendron giganteum
SEGI_23785 Sequoiadendron giganteum
SEGI_24160 Sequoiadendron giganteum
SEGI_32368 Sequoiadendron giganteum
SEGI_32756 Sequoiadendron giganteum
SEGI_34222 Sequoiadendron giganteum
SEGI_34540 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30414 Striga asiatica
SGA_v2.0_scaffold119G32746 Striga asiatica
SGA_v2.0_scaffold147G36324 Striga asiatica
SGA_v2.0_scaffold3G01642 Striga asiatica
SGA_v2.0_scaffold70G23531 Striga asiatica
SHI19943 Sapria himalayana
SHI19944 Sapria himalayana
SHI20751 Sapria himalayana
SHI25342 Sapria himalayana
SHI26139 Sapria himalayana
SHI26140 Sapria himalayana
SMO147G0130 Selaginella moellendorffii
SMO330G0020 Selaginella moellendorffii
Solyc01g087500.3 Solanum lycopersicum
Sopen01g034420 Solanum pennellii
Sp5g19340 Schrenkiella parvula
Sp7g26900 Schrenkiella parvula
TAR369G0754 Trochodendron aralioides
TAR623G1165 Trochodendron aralioides
THA.LOC104820131 Tarenaya hassleriana
Thecc.10G041300 Theobroma cacao
Thhalv10002141m.g Eutrema salsugineum
Thhalv10024219m.g Eutrema salsugineum
TPR.G17174 Trifolium pratense
TPR.G17543 Trifolium pratense
TPR.G17545 Trifolium pratense
TPR.G22438 Trifolium pratense
TPR.G27843 Trifolium pratense
TPR.G30848 Trifolium pratense
TPR.G32072 Trifolium pratense
TPR.G8264 Trifolium pratense
TWI09G0750 Tripterygium wilfordii
TWI73G0071 Tripterygium wilfordii
unitig_22.g5326 Utricularia gibba
unitig_8.g3777 Utricularia gibba
unitig_8.g3778 Utricularia gibba
vmacro07104 Vaccinium macrocarpon
vmacro08887 Vaccinium macrocarpon
vmacro14860 Vaccinium macrocarpon
VMungo1080G1747 Vigna mungo
Zm00001eb188030 Zea mays
Zm00001eb190460 Zea mays
Zm00001eb251620 Zea mays

User provided reference genes

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