Gene: AT2G13720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G13720
  • Transcript Identifier AT2G13720.1
  • Gene Type Coding gene
  • Location Chr2 : 5724039-5725248 : positive

Gene Family Information

  • ID HOM05D002263
  • #Genes/#Species 298/100
  • Phylogenetic origin
  • ID ORTHO05D081494
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G13720.1
  • uniprot Q9SKH1

Descriptions

  • Description putative DNA topoisomerase
  • Computational description DNA topoisomerase (ATP-hydrolyzing)s;ATP binding;DNA binding; FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change; LOCATED IN: chromosome; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 508 Blast hits to 508 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 78; Fungi - 205; Plants - 50; Viruses - 12; Other Eukaryotes - 163 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006265
IEA
Gene OntologyDNA topological change
GO:0006265
IEA
InterProDNA topological change
GO:0006259
ISO
PLAZA Homology (enrichment)DNA metabolic process HOM05D002263

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
Gene OntologyDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003918
IEA
Gene OntologyDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524
IEA
Gene OntologyATP binding
GO:0005524
IEA
InterProATP binding
GO:0016853
IEA
GOA Databaseisomerase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031660 C-terminal associated domain of TOPRIM
IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal
IPR013760 DNA topoisomerase, type IIA-like domain superfamily
Mapman id Description
35.1 not assigned.annotated