Gene: Thecc.10G041300
General Information
Structural Information
- Species Theobroma cacao
- Gene Identifier Thecc.10G041300
- Transcript Identifier Thecc.10G041300.1
- Gene Type Coding gene
- Location Chromosome_10 : 2173744-2180119 : positive
Gene Family Information
- ID HOM05D002263
- #Genes/#Species 298/100
- Phylogenetic origin
- ID ORTHO05D003537
- #Genes/#Species 217/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Thecc.10G041300.v2.1
- pacid 42025206
- ancestorIdentifier Thecc1EG042757.CGDv1.1
- ancestorIdentifier Thecc1EG042757t1.CGDv1.1
Descriptions
- Description DNA topoisomerase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | InterPro | DNA topological change | |
| GO:0006259 | IEA | InterPro | DNA metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G23890 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013759 | DNA topoisomerase, type IIA, subunit B, C-terminal |
| IPR013758 | DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta |
| IPR013760 | DNA topoisomerase, type IIA-like domain superfamily |
| IPR002205 | DNA topoisomerase, type IIA, subunit A/C-terminal |
| IPR031660 | C-terminal associated domain of TOPRIM |
| IPR013506 | DNA topoisomerase, type IIA, subunit B, domain 2 |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR001241 | DNA topoisomerase, type IIA |
| IPR013757 | Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily |
| IPR006171 | TOPRIM domain |
| IPR036890 | Histidine kinase/HSP90-like ATPase superfamily |
| IPR034157 | DNA topoisomerase 2, TOPRIM domain |
| IPR001154 | DNA topoisomerase II, eukaryotic-type |
| IPR003594 | Histidine kinase/HSP90-like ATPase |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| Mapman id | Description |
|---|---|
| 13.2.1.6 | Cell cycle organisation.DNA replication.preinitiation.DNA topoisomerase (TOP2) |