Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34350 Brassica napus
A01p34360 Brassica napus
A05p28600 Brassica napus
Aa31LG10G3690 Aethionema arabicum
Aa31LG8G7130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2463 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.189 Anthoceros agrestis
Actinidia04201 Actinidia chinensis
Actinidia05072 Actinidia chinensis
Actinidia22156 Actinidia chinensis
Actinidia32273 Actinidia chinensis
Ah.06g182500 Amaranthus hybridus
Ah.14g085620 Amaranthus hybridus
AL3G34040 Arabidopsis lyrata
AL3G34050 Arabidopsis lyrata
Aqoxy1G02961 Aquilegia oxysepala
Aqoxy2G01186 Aquilegia oxysepala
Aqoxy2G01188 Aquilegia oxysepala
Aqoxy7G04120 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4VH6VS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MLP8YM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SM06HE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZASA6B Arachis hypogaea
AT3G20320 Arabidopsis thaliana
AT3G20330 Arabidopsis thaliana
ATR0559G336 Amborella trichopoda
ATR0772G119 Amborella trichopoda
Atru.chr1.3234 Acer truncatum
Atru.chr1.3238 Acer truncatum
Atru.chr4.1269 Acer truncatum
AUR62015837 Chenopodium quinoa
AUR62020382 Chenopodium quinoa
AUR62031652 Chenopodium quinoa
AUR62038882 Chenopodium quinoa
BcaB04g20659 Brassica carinata
BcaB04g20660 Brassica carinata
BcaB06g26098 Brassica carinata
BcaC05g28317 Brassica carinata
BcaC05g28319 Brassica carinata
BcaC09g48987 Brassica carinata
BolC1t04335H Brassica oleracea
BolC5t33119H Brassica oleracea
BolC5t33124H Brassica oleracea
BraA01t03532Z Brassica rapa
BraA01t03533Z Brassica rapa
BraA05t21737Z Brassica rapa
C01p43760 Brassica napus
C01p43770 Brassica napus
C05p44010 Brassica napus
CAN.G1131.18 Capsicum annuum
CAN.G166.12 Capsicum annuum
CAN.G321.61 Capsicum annuum
CAN.G532.29 Capsicum annuum
CAN.G809.29 Capsicum annuum
CANSAT01G0306 Cannabis sativa
CANSAT78G1637 Cannabis sativa
CARHR095970 Cardamine hirsuta
CARHR095980 Cardamine hirsuta
Carub.0003s2027 Capsella rubella
Carub.0003s2028 Capsella rubella
Ca_04336_v3 Cicer arietinum L.
Ca_06168_v3 Cicer arietinum L.
Ca_06185_v3 Cicer arietinum L.
Ca_06342_v3 Cicer arietinum L.
Ca_18260_v3 Cicer arietinum L.
CBR_g24153 Chara braunii
CBR_g4282 Chara braunii
Cc05_g14160 Coffea canephora
Cc09_g04780 Coffea canephora
CDE08G1601 Ceratophyllum demersum
CDE12G0428 Ceratophyllum demersum
Cfa004646 Carpinus fangiana
Cfa020294 Carpinus fangiana
Ciclev10020598m.g Citrus clementina
Ciclev10025758m.g Citrus clementina
CiPaw.01G095700 Carya illinoinensis
CiPaw.06G167000 Carya illinoinensis
CiPaw.11G193600 Carya illinoinensis
ClCG02G003310 Citrullus lanatus
ClCG04G002470 Citrullus lanatus
ClCG09G018870 Citrullus lanatus
ClCG10G005230 Citrullus lanatus
COL.COLO4_08219 Corchorus olitorius
COL.COLO4_09707 Corchorus olitorius
Cpa.g.c39485 Carica papaya
Cpa.g.sc12.257 Carica papaya
Cre02.g079700 Chlamydomonas reinhardtii
Cre09.g395028 Chlamydomonas reinhardtii
Cre16.g694400 Chlamydomonas reinhardtii
CsaV3_3G004920 Cucumis sativus L.
CsaV3_7G002030 Cucumis sativus L.
CSS0017930 Camellia sinensis var. sinensis
CSS0048828 Camellia sinensis var. sinensis
DCAR_003742 Daucus carota
DCAR_007772 Daucus carota
DCAR_013195 Daucus carota
Dinv17874 Davidia involucrata
Dinv21066 Davidia involucrata
Dinv40788 Davidia involucrata
Duzib151G0469 Durio zibethinus
Duzib212G0454 Durio zibethinus
Duzib213G0660 Durio zibethinus
ECA236G1011 Erigeron canadensis
ECA236G4434 Erigeron canadensis
ECA246G0156 Erigeron canadensis
ECA246G0582 Erigeron canadensis
EL10Ac2g03438 Beta vulgaris
EL10Ac4g07746 Beta vulgaris
Eucgr.F03492 Eucalyptus grandis
Eucgr.I00215 Eucalyptus grandis
FAN01G2257 Fragaria x ananassa
FAN03G2363 Fragaria x ananassa
FAN06G0459 Fragaria x ananassa
FAN06G2468 Fragaria x ananassa
FAN07G1453 Fragaria x ananassa
FAN12G4101 Fragaria x ananassa
FAN19G2557 Fragaria x ananassa
FAN22G1550 Fragaria x ananassa
FAN22G2117 Fragaria x ananassa
FAN23G2661 Fragaria x ananassa
FAN26G0200 Fragaria x ananassa
FAN28G2322 Fragaria x ananassa
FvH4_1g23450 Fragaria vesca
FvH4_4g09330 Fragaria vesca
FvH4_7g16631 Fragaria vesca
Glyma.02G275800 Glycine max
Glyma.02G293500 Glycine max
Glyma.05G131400 Glycine max
Glyma.08G086000 Glycine max
Glyma.09G110200 Glycine max
Glyma.13G074600 Glycine max
Glyma.14G021000 Glycine max
Glyma.14G040300 Glycine max
Glyma.20G048400 Glycine max
Gohir.1Z049537 Gossypium hirsutum
Gohir.A02G114100 Gossypium hirsutum
Gohir.A08G072300 Gossypium hirsutum
Gohir.A08G075500 Gossypium hirsutum
Gohir.A10G139900 Gossypium hirsutum
Gohir.D05G373500 Gossypium hirsutum
Gohir.D10G126900 Gossypium hirsutum
Gorai.009G442200 Gossypium raimondii
Gorai.011G139800 Gossypium raimondii
GSVIVG01010853001 Vitis vinifera
GSVIVG01037706001 Vitis vinifera
HanXRQChr02g0033051 Helianthus annuus
HanXRQChr08g0233571 Helianthus annuus
HanXRQChr12g0380031 Helianthus annuus
HanXRQChr15g0470591 Helianthus annuus
Haze_01451 Corylus avellana
Haze_09725 Corylus avellana
Haze_10243 Corylus avellana
Hma1.2p1_0036F.1_g023230 Hydrangea macrophylla
Hma1.2p1_1220F.1_g268110 Hydrangea macrophylla
Hma1.2p1_1220F.1_g268115 Hydrangea macrophylla
Hma1.2p1_2907F.1_g330140 Hydrangea macrophylla
Hma1.2p1_2907F.1_g330145 Hydrangea macrophylla
HPP92_018143 Vanilla planifolia
HPP92_018526 Vanilla planifolia
Hund03181 Selenicereus undatus
Hund23211 Selenicereus undatus
Lalb_Chr04g0249531 Lupinus albus
Lalb_Chr12g0209021 Lupinus albus
Lalb_Chr17g0347631 Lupinus albus
Lj1A1151T82 Lonicera japonica
Lj1A1151T83 Lonicera japonica
Lj1A879T54 Lonicera japonica
Lj2A342T117 Lonicera japonica
Lj3A865T85 Lonicera japonica
Lj6g0007258 Lotus japonicus
LjContig00272g0002880 Lotus japonicus
Lsat_1_v5_gn_0_47481 Lactuca sativa
Lsat_1_v5_gn_0_6420 Lactuca sativa
Lsat_1_v5_gn_3_102740 Lactuca sativa
Lsat_1_v5_gn_3_138320 Lactuca sativa
Lsat_1_v5_gn_5_3200 Lactuca sativa
Lsat_1_v5_gn_7_113801 Lactuca sativa
Manes.04G047300 Manihot esculenta
Manes.15G067500 Manihot esculenta
Mapoly0038s0049 Marchantia polymorpha
Mapoly0135s0050 Marchantia polymorpha
MBI06_g04395_MAGBIO Magnolia biondii
MBI14_g20102_MAGBIO Magnolia biondii
MCO06G271 Micromonas commoda
MCO07G431 Micromonas commoda
MD04G1045800 Malus domestica
MD13G1257900 Malus domestica
MD13G1258100 Malus domestica
MD15G1397500 Malus domestica
Medtr3g040090 Medicago truncatula
Medtr4g096900 Medicago truncatula
Medtr5g088340 Medicago truncatula
Medtr5g093570 Medicago truncatula
MELO3C014189.2 Cucumis melo
MELO3C015704.2 Cucumis melo
Migut.H01801 Erythranthe guttata
Migut.M02025 Erythranthe guttata
MSTRG.14456 Avicennia marina
MSTRG.24953 Avicennia marina
Nitab4.5_0000632g0010 Nicotiana tabacum
Nitab4.5_0001907g0020 Nicotiana tabacum
Nitab4.5_0002649g0050 Nicotiana tabacum
Nitab4.5_0003902g0080 Nicotiana tabacum
Nn1g03399 Nelumbo nucifera
Nn1g07265 Nelumbo nucifera
Nn2g10363 Nelumbo nucifera
Oeu010462.1 Olea europaea
Oeu010464.1 Olea europaea
Oeu013123.1 Olea europaea
Oeu037772.1 Olea europaea
Os01g0974000 Oryza sativa ssp. japonica
Os08g0248800 Oryza sativa ssp. japonica
Peaxi162Scf00036g02120 Petunia axillaris
Peaxi162Scf00036g02121 Petunia axillaris
Peaxi162Scf00276g01115 Petunia axillaris
Peaxi162Scf00493g00312 Petunia axillaris
Peaxi162Scf00580g00069 Petunia axillaris
PGR031G2540 Punica granatum
PGR083G0908 Punica granatum
PGR093G0005 Punica granatum
PGSC0003DMG400000980 Solanum tuberosum
PGSC0003DMG400007324 Solanum tuberosum
Phvul.006G021000 Phaseolus vulgaris
Phvul.008G205800 Phaseolus vulgaris
Phvul.008G270600 Phaseolus vulgaris
Potri.001G357200 Populus trichocarpa
Potri.007G131700 Populus trichocarpa
Potri.017G026100 Populus trichocarpa
Pp3c11_8230 Physcomitrium patens
Pp3c12_4060 Physcomitrium patens
Pp3c1_7810 Physcomitrium patens
Pp3c3_12480 Physcomitrium patens
PRCOL_00002736 Prasinoderma coloniale
PRCOL_00003403 Prasinoderma coloniale
Prupe.1G198700 Prunus persica
Prupe.4G221200 Prunus persica
Psat2g012520 Pisum sativum
Psat2g021160 Pisum sativum
Psat5g187680 Pisum sativum
Psat7g089200 Pisum sativum
PSO063G0678 Papaver somniferum
PSO151G0006 Papaver somniferum
PSO339G3553 Papaver somniferum
QL02p069440 Quercus lobata
QL06p008756 Quercus lobata
QL08p007027 Quercus lobata
QL10p051275 Quercus lobata
QL11p031638 Quercus lobata
RcHm_v2.0_Chr2g0118821 Rosa chinensis
RcHm_v2.0_Chr4g0402721 Rosa chinensis
RcHm_v2.0_Chr6g0264841 Rosa chinensis
Rhsim06G0222300 Rhododendron simsii
Rhsim07G0082300 Rhododendron simsii
Rhsim09G0178000 Rhododendron simsii
Sabra07G0106900 Salix brachista
Sabra07G0118800 Salix brachista
Sabra16G0235200 Salix brachista
Sabra17G0000800 Salix brachista
Sabra17G0015800 Salix brachista
SalBow5G0693 Salvia bowleyana
Sc06g0004500 Simmondsia chinensis
Sc07g0004100 Simmondsia chinensis
Sc07g0004110 Simmondsia chinensis
Sc19g0002800 Simmondsia chinensis
Sed0017575 Sechium edule
Sed0025734 Sechium edule
SEGI_04192 Sequoiadendron giganteum
SEGI_07155 Sequoiadendron giganteum
SEGI_07334 Sequoiadendron giganteum
SEGI_29547 Sequoiadendron giganteum
SEGI_37825 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32847 Striga asiatica
SGA_v2.0_scaffold16G07839 Striga asiatica
SHI26581 Sapria himalayana
SHI29120 Sapria himalayana
SMO339G0015 Selaginella moellendorffii
SMO356G0377 Selaginella moellendorffii
Solyc02g082030.3 Solanum lycopersicum
Solyc11g006350.1 Solanum lycopersicum
Sopen02g026670 Solanum pennellii
Sopen11g002250 Solanum pennellii
Sp3g18350 Schrenkiella parvula
Sp3g18360 Schrenkiella parvula
Sp6g12890 Schrenkiella parvula
TAR369G0031 Trochodendron aralioides
TAR623G0168 Trochodendron aralioides
TAR623G1172 Trochodendron aralioides
TAR627G0566 Trochodendron aralioides
TAR629G1251 Trochodendron aralioides
THA.LOC104817851 Tarenaya hassleriana
THA.LOC104817853 Tarenaya hassleriana
Thecc.04G174100 Theobroma cacao
Thecc.07G030500 Theobroma cacao
Thhalv10020870m.g Eutrema salsugineum
Thhalv10020922m.g Eutrema salsugineum
TPR.G11324 Trifolium pratense
TPR.G1169 Trifolium pratense
TPR.G2908 Trifolium pratense
TWI38G0996 Tripterygium wilfordii
TWI38G1671 Tripterygium wilfordii
TWI39G1031 Tripterygium wilfordii
unitig_748.g7486 Utricularia gibba
unitig_8.g4479 Utricularia gibba
vmacro12410 Vaccinium macrocarpon
vmacro13897 Vaccinium macrocarpon
vmacro22326 Vaccinium macrocarpon
VMungo0540G0891 Vigna mungo
VMungo0647G1381 Vigna mungo
VMungo0647G1998 Vigna mungo
VMungo0647G2153 Vigna mungo
Zm00001eb139760 Zea mays
Zm00001eb178070 Zea mays
Zm00001eb362140 Zea mays
Zm00001eb412930 Zea mays

User provided reference genes

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