Gene: Sopen11g002250

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g002250
  • Transcript Identifier Sopen11g002250.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 1117266-1118402 : negative

Gene Family Information

  • ID HOM05D002112
  • #Genes/#Species 316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g002250.1

Descriptions

  • Description Aspartate carbamoyltransferase 2, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 2) (ATCase 2) - Pisum sativum (Garden pea), encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis | PYRIMIDINE B (PYRB) | FUNCTIONS IN: amino acid binding, protein binding, aspartate carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity | INVOLVED IN: cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, cellular amino acid metabolic process | LOCATED IN: chloroplast, chloroplast stroma | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding , Aspartate/ornithine carbamoyltransferase , Aspartate carbamoyltransferase, eukaryotic , Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain | BEST Arabidopsis thaliana protein match is: ornithine carbamoyltransferase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006520
IEA
InterProcellular amino acid metabolic process
GO:0006207
IEA
InterPro'de novo' pyrimidine nucleobase biosynthetic process
GO:0009220
ISO
PLAZA Integrative Orthologypyrimidine ribonucleotide biosynthetic process AT3G20330
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT3G20330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016597
IEA
InterProamino acid binding
GO:0016743
IEA
InterProcarboxyl- or carbamoyltransferase activity
GO:0004070
IEA
InterProaspartate carbamoyltransferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G20330
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G20330
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G20330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036901 Aspartate/ornithine carbamoyltransferase superfamily
IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
IPR002082 Aspartate carbamoyltransferase
IPR006130 Aspartate/ornithine carbamoyltransferase
Mapman id Description
6.2.1.2 Nucleotide metabolism.pyrimidines.de novo biosynthesis.aspartate transcarbamoylase