Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p60560 Brassica napus
A04p03050 Brassica napus
A08p18770 Brassica napus
A09p50430 Brassica napus
Aa31LG2G19150 Aethionema arabicum
Aa31sc1187G30 Aethionema arabicum
Aa31sc992G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.676 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3516 Anthoceros agrestis
Actinidia03327 Actinidia chinensis
Actinidia03569 Actinidia chinensis
Actinidia14156 Actinidia chinensis
Actinidia25728 Actinidia chinensis
Ah.04g156720 Amaranthus hybridus
Ah.05g177530 Amaranthus hybridus
Ah.05g177540 Amaranthus hybridus
AL5G39140 Arabidopsis lyrata
AL7G20910 Arabidopsis lyrata
Aqoxy4G02471 Aquilegia oxysepala
Aqoxy5G02379 Aquilegia oxysepala
Aqoxy6G00128 Aquilegia oxysepala
Aqoxy6G01297 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8Q3S3N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ME62WN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WQ4U6A Arachis hypogaea
AT3G57560 Arabidopsis thaliana
AT4G31160 Arabidopsis thaliana
ATR0584G173 Amborella trichopoda
ATR0782G017 Amborella trichopoda
Atru.chr7.2707 Acer truncatum
Atru.chr7.2708 Acer truncatum
Atru.chr7.2709 Acer truncatum
AUR62004328 Chenopodium quinoa
AUR62020667 Chenopodium quinoa
AUR62028065 Chenopodium quinoa
AUR62033316 Chenopodium quinoa
AUR62033343 Chenopodium quinoa
BcaB02g08309 Brassica carinata
BcaB03g12684 Brassica carinata
BcaC01g01107 Brassica carinata
BcaC02g09949 Brassica carinata
BcaC07g40367 Brassica carinata
BcaC07g40389 Brassica carinata
BcaNung01540 Brassica carinata
BcaNung01541 Brassica carinata
BolC3t21123H Brassica oleracea
BolC4t25037H Brassica oleracea
BolC7t46302H Brassica oleracea
BolC8t50911H Brassica oleracea
BraA03t15097Z Brassica rapa
BraA04t16028Z Brassica rapa
BraA08t33838Z Brassica rapa
BraA09t40494Z Brassica rapa
C03p88150 Brassica napus
C04p34850 Brassica napus
C07p58470 Brassica napus
C08p33110 Brassica napus
CAN.G135.28 Capsicum annuum
CAN.G195.8 Capsicum annuum
CAN.G506.1 Capsicum annuum
CANSAT25G0165 Cannabis sativa
CANSAT25G2792 Cannabis sativa
CARHR167790 Cardamine hirsuta
CARHR239070 Cardamine hirsuta
Carub.0005s2440 Capsella rubella
Carub.0007s0937 Capsella rubella
Ca_15684_v3 Cicer arietinum L.
CBR_g37392 Chara braunii
CBR_g38963 Chara braunii
CBR_g84854 Chara braunii
Cc00_g09840 Coffea canephora
Cc00_g30070 Coffea canephora
Cc07_g16840 Coffea canephora
Cc07_g16850 Coffea canephora
Cc07_g17450 Coffea canephora
CDE02G1944 Ceratophyllum demersum
CDE08G1677 Ceratophyllum demersum
Cfa013231 Carpinus fangiana
Cfa013233 Carpinus fangiana
Ciclev10007230m.g Citrus clementina
Ciclev10008739m.g Citrus clementina
CiPaw.07G216200 Carya illinoinensis
CiPaw.07G216400 Carya illinoinensis
CiPaw.08G017100 Carya illinoinensis
ClCG05G017350 Citrullus lanatus
ClCG08G012830 Citrullus lanatus
COL.COLO4_15466 Corchorus olitorius
COL.COLO4_18641 Corchorus olitorius
Cpa.g.sc148.12 Carica papaya
Cpa.g.sc6.178 Carica papaya
Cre01.g015000 Chlamydomonas reinhardtii
Cre17.g725450 Chlamydomonas reinhardtii
CsaV3_2G031570 Cucumis sativus L.
CsaV3_3G046860 Cucumis sativus L.
CSS0019677 Camellia sinensis var. sinensis
CSS0033264 Camellia sinensis var. sinensis
DCAR_002179 Daucus carota
DCAR_020609 Daucus carota
DCAR_030972 Daucus carota
Dinv03356 Davidia involucrata
Dinv09451 Davidia involucrata
Dinv09452 Davidia involucrata
Dinv09453 Davidia involucrata
Dinv37481 Davidia involucrata
Dinv37482 Davidia involucrata
Duzib116G0244 Durio zibethinus
Duzib168G1462 Durio zibethinus
Duzib177G0635 Durio zibethinus
Duzib187G1591 Durio zibethinus
ECA234G1135 Erigeron canadensis
ECA240G1370 Erigeron canadensis
ECA248G2210 Erigeron canadensis
EL10Ac2g03672 Beta vulgaris
EL10Ac7g17257 Beta vulgaris
Eucgr.C00279 Eucalyptus grandis
Eucgr.C02143 Eucalyptus grandis
Eucgr.C03980 Eucalyptus grandis
FAN20G0200 Fragaria x ananassa
FAN20G1121 Fragaria x ananassa
FAN20G1771 Fragaria x ananassa
FAN24G1054 Fragaria x ananassa
FAN24G2569 Fragaria x ananassa
FAN27G1718 Fragaria x ananassa
FAN27G2203 Fragaria x ananassa
FvH4_2g30500 Fragaria vesca
FvH4_2g30560 Fragaria vesca
Glyma.04G073800 Glycine max
Glyma.04G073900 Glycine max
Glyma.06G074900 Glycine max
Glyma.06G075000 Glycine max
Glyma.14G131100 Glycine max
Gohir.A08G253200 Gossypium hirsutum
Gohir.A13G118600 Gossypium hirsutum
Gohir.D08G274833 Gossypium hirsutum
Gohir.D08G274900 Gossypium hirsutum
Gohir.D13G122400 Gossypium hirsutum
Gorai.004G293400 Gossypium raimondii
Gorai.013G137200 Gossypium raimondii
GSVIVG01035586001 Vitis vinifera
GSVIVG01035587001 Vitis vinifera
HanXRQChr03g0082961 Helianthus annuus
HanXRQChr10g0278011 Helianthus annuus
HanXRQChr10g0278111 Helianthus annuus
HanXRQChr11g0330611 Helianthus annuus
HanXRQChr15g0492511 Helianthus annuus
Haze_05098 Corylus avellana
Haze_20257 Corylus avellana
Haze_21661 Corylus avellana
Haze_21662 Corylus avellana
Haze_27393 Corylus avellana
Hma1.2p1_0214F.1_g090630 Hydrangea macrophylla
Hma1.2p1_0214F.1_g090640 Hydrangea macrophylla
Hma1.2p1_0214F.1_g090650 Hydrangea macrophylla
Hma1.2p1_0319F.1_g123860 Hydrangea macrophylla
Hma1.2p1_1382F.1_g279370 Hydrangea macrophylla
Hma1.2p1_1382F.1_g279380 Hydrangea macrophylla
Hma1.2p1_1382F.1_g279390 Hydrangea macrophylla
Hma1.2p1_2010F.1_g311000 Hydrangea macrophylla
Hma1.2p1_2176F.1_g316120 Hydrangea macrophylla
Hma1.2p1_2176F.1_g316130 Hydrangea macrophylla
Hma1.2p1_3002F.1_g331530 Hydrangea macrophylla
HPP92_022465 Vanilla planifolia
HPP92_025041 Vanilla planifolia
Hund03252 Selenicereus undatus
Hund03253 Selenicereus undatus
Hund19377 Selenicereus undatus
Hund19379 Selenicereus undatus
Lalb_Chr08g0243691 Lupinus albus
Lalb_Chr11g0064041 Lupinus albus
Lalb_Chr23g0268941 Lupinus albus
Lj1g0005088 Lotus japonicus
Lj1g0006019 Lotus japonicus
Lj1g0010809 Lotus japonicus
Lj1g0019909 Lotus japonicus
Lj5g0025434 Lotus japonicus
Lj7A751T36 Lonicera japonica
Lj8A3T12 Lonicera japonica
Lsat_1_v5_gn_5_164581 Lactuca sativa
Lsat_1_v5_gn_5_59360 Lactuca sativa
Manes.07G077700 Manihot esculenta
Manes.10G056500 Manihot esculenta
Manes.16G138600 Manihot esculenta
Mapoly0031s0070 Marchantia polymorpha
Mapoly0062s0116 Marchantia polymorpha
MBI05_g22526_MAGBIO Magnolia biondii
MBI09_g01931_MAGBIO Magnolia biondii
MBI09_g40924_MAGBIO Magnolia biondii
MCO12G331 Micromonas commoda
MD08G1132100 Malus domestica
MD08G1134500 Malus domestica
MD08G1134600 Malus domestica
MD15G1113300 Malus domestica
Medtr3g108460 Medicago truncatula
Medtr3g108470 Medicago truncatula
MELO3C003650.2 Cucumis melo
MELO3C011208.2 Cucumis melo
Migut.A00462 Erythranthe guttata
Migut.E01403 Erythranthe guttata
Migut.E01404 Erythranthe guttata
Migut.E01409 Erythranthe guttata
Migut.F01615 Erythranthe guttata
Migut.H01099 Erythranthe guttata
MSTRG.23424 Avicennia marina
MSTRG.25765 Avicennia marina
MSTRG.2681 Avicennia marina
Nitab4.5_0000320g0090 Nicotiana tabacum
Nitab4.5_0000919g0010 Nicotiana tabacum
Nitab4.5_0003528g0010 Nicotiana tabacum
Nitab4.5_0006112g0010 Nicotiana tabacum
Nitab4.5_0009273g0010 Nicotiana tabacum
Nitab4.5_0026868g0010 Nicotiana tabacum
Nitab4.5_0026868g0020 Nicotiana tabacum
Nn1g00932 Nelumbo nucifera
Nn1g08375 Nelumbo nucifera
Oeu019002.1 Olea europaea
Oeu048127.1 Olea europaea
Oeu054666.1 Olea europaea
Oeu057143.1 Olea europaea
Os02g0657600 Oryza sativa ssp. japonica
Os04g0550500 Oryza sativa ssp. japonica
Os04g0691200 Oryza sativa ssp. japonica
Peaxi162Scf00178g00004 Petunia axillaris
Peaxi162Scf00213g01313 Petunia axillaris
Peaxi162Scf00896g00012 Petunia axillaris
PGR044G2064 Punica granatum
PGR044G2421 Punica granatum
PGR102G0041 Punica granatum
PGSC0003DMG400003981 Solanum tuberosum
PGSC0003DMG401029595 Solanum tuberosum
Phvul.009G099600 Phaseolus vulgaris
Phvul.009G099700 Phaseolus vulgaris
Potri.006G280100 Populus trichocarpa
Potri.006G280200 Populus trichocarpa
Potri.018G001600 Populus trichocarpa
Pp3c1_12700 Physcomitrium patens
Pp3c1_12703 Physcomitrium patens
Pp3c2_24840 Physcomitrium patens
Pp3c3_18520 Physcomitrium patens
Pp3c4_8600 Physcomitrium patens
PRCOL_00003640 Prasinoderma coloniale
Prupe.1G463700 Prunus persica
Prupe.1G463900 Prunus persica
Psat5g026040 Pisum sativum
Psat5g026120 Pisum sativum
PSO017G1653 Papaver somniferum
PSO063G0181 Papaver somniferum
PSO063G5534 Papaver somniferum
PSO170G5891 Papaver somniferum
QL12p030895 Quercus lobata
QL12p030933 Quercus lobata
RcHm_v2.0_Chr3g0471221 Rosa chinensis
RcHm_v2.0_Chr5g0021691 Rosa chinensis
RcHm_v2.0_Chr6g0246551 Rosa chinensis
RcHm_v2.0_Chr6g0292021 Rosa chinensis
RcHm_v2.0_Chr6g0312521 Rosa chinensis
RcHm_v2.0_Chr6g0312541 Rosa chinensis
RcHm_v2.0_Chr7g0238931 Rosa chinensis
Rhsim01G0105900 Rhododendron simsii
Rhsim07G0172400 Rhododendron simsii
Rhsim07G0173100 Rhododendron simsii
Rhsim07G0173400 Rhododendron simsii
RhsimUnG0016600 Rhododendron simsii
Sabra06G0217200 Salix brachista
Sabra18G0005300 Salix brachista
SalBow4G1905 Salvia bowleyana
SalBow6G1621 Salvia bowleyana
Sc09g0007440 Simmondsia chinensis
Sc23g0004440 Simmondsia chinensis
Sc23g0004610 Simmondsia chinensis
Sc23g0004670 Simmondsia chinensis
Sc23g0004690 Simmondsia chinensis
Sc23g0004740 Simmondsia chinensis
Sc23g0004780 Simmondsia chinensis
Sc23g0004800 Simmondsia chinensis
Sed0009824 Sechium edule
Sed0015816 Sechium edule
Sed0016385 Sechium edule
Sed0022277 Sechium edule
SEGI_07751 Sequoiadendron giganteum
SEGI_17498 Sequoiadendron giganteum
SEGI_19958 Sequoiadendron giganteum
SEGI_24212 Sequoiadendron giganteum
SEGI_28363 Sequoiadendron giganteum
SEGI_29454 Sequoiadendron giganteum
SEGI_35978 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40648 Striga asiatica
SGA_v2.0_scaffold231G43409 Striga asiatica
SGA_v2.0_scaffold27G11691 Striga asiatica
SHI12423 Sapria himalayana
SHI21131 Sapria himalayana
SHI50541 Sapria himalayana
SMO364G0053 Selaginella moellendorffii
Solyc08g074370.4 Solanum lycopersicum
Solyc11g005620.1 Solanum lycopersicum
Sopen08g023030 Solanum pennellii
Sopen11g001580 Solanum pennellii
Sp5g05030 Schrenkiella parvula
Sp7g29040 Schrenkiella parvula
TAR628G0359 Trochodendron aralioides
TAR636G3119 Trochodendron aralioides
THA.LOC104802261 Tarenaya hassleriana
THA.LOC104803581 Tarenaya hassleriana
THA.LOC104803889 Tarenaya hassleriana
Thecc.03G146100 Theobroma cacao
Thecc.08G172900 Theobroma cacao
Thecc.09G001100 Theobroma cacao
Thhalv10006042m.g Eutrema salsugineum
Thhalv10024189m.g Eutrema salsugineum
TPR.G12308 Trifolium pratense
TPR.G12447 Trifolium pratense
TPR.G39361 Trifolium pratense
TPR.G7111 Trifolium pratense
TWI14G0248 Tripterygium wilfordii
TWI32G0793 Tripterygium wilfordii
TWI63G1280 Tripterygium wilfordii
unitig_26.g8827 Utricularia gibba
unitig_8.g3509 Utricularia gibba
vmacro05091 Vaccinium macrocarpon
vmacro20743 Vaccinium macrocarpon
VMungo0464G0912 Vigna mungo
VMungo1309G2917 Vigna mungo
Zm00001eb074610 Zea mays
Zm00001eb076460 Zea mays
Zm00001eb186530 Zea mays
Zm00001eb434410 Zea mays

User provided reference genes

Program Settings