Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15540 Brassica napus
A04p14800 Brassica napus
A04p14860 Brassica napus
A04p18860 Brassica napus
A05p15940 Brassica napus
A05p15970 Brassica napus
A06p13020 Brassica napus
A09p60590 Brassica napus
Aa31LG7G1970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4386 Anthoceros agrestis
Actinidia04590 Actinidia chinensis
Actinidia12842 Actinidia chinensis
Ah.00g001180 Amaranthus hybridus
Ah.00g001190 Amaranthus hybridus
Ah.00g001200 Amaranthus hybridus
Ah.00g001210 Amaranthus hybridus
Ah.00g001220 Amaranthus hybridus
Ah.00g001230 Amaranthus hybridus
Ah.04g160580 Amaranthus hybridus
Ah.04g160590 Amaranthus hybridus
Ah.04g160600 Amaranthus hybridus
Ah.04g160610 Amaranthus hybridus
Ah.04g160620 Amaranthus hybridus
Ah.04g160630 Amaranthus hybridus
Ah.04g160640 Amaranthus hybridus
Ah.04g160650 Amaranthus hybridus
Ah.04g160670 Amaranthus hybridus
Ah.14g079460 Amaranthus hybridus
Ah.14g079470 Amaranthus hybridus
Ah.14g079480 Amaranthus hybridus
Ah.14g079500 Amaranthus hybridus
Ah.14g079520 Amaranthus hybridus
Ah.14g079530 Amaranthus hybridus
Ah.14g085950 Amaranthus hybridus
AL1G29340 Arabidopsis lyrata
AL4G24000 Arabidopsis lyrata
AL4G27430 Arabidopsis lyrata
AL5G21350 Arabidopsis lyrata
AL707U10020 Arabidopsis lyrata
Aqoxy1G01806 Aquilegia oxysepala
Aqoxy1G01830 Aquilegia oxysepala
Aqoxy1G01832 Aquilegia oxysepala
Aqoxy1G01833 Aquilegia oxysepala
Aqoxy2G03913 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0E0Z25 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CTV4I1 Arachis hypogaea
AT1G17130 Arabidopsis thaliana
AT2G29430 Arabidopsis thaliana
AT2G32050 Arabidopsis thaliana
AT3G43250 Arabidopsis thaliana
ATR0681G207 Amborella trichopoda
Atru.chr2.3694 Acer truncatum
Atru.chr2.655 Acer truncatum
Atru.chr3.3953 Acer truncatum
Atru.chr7.1964 Acer truncatum
AUR62002972 Chenopodium quinoa
AUR62006425 Chenopodium quinoa
AUR62007777 Chenopodium quinoa
AUR62029774 Chenopodium quinoa
BcaB02g06687 Brassica carinata
BcaB02g10247 Brassica carinata
BcaB02g10250 Brassica carinata
BcaB06g27647 Brassica carinata
BcaB06g27648 Brassica carinata
BcaB06g27652 Brassica carinata
BcaC02g08934 Brassica carinata
BcaC02g08935 Brassica carinata
BcaC02g08936 Brassica carinata
BcaC02g08937 Brassica carinata
BcaC03g15022 Brassica carinata
BcaC04g19890 Brassica carinata
BcaC05g25433 Brassica carinata
BcaC05g25667 Brassica carinata
BcaC07g41401 Brassica carinata
BcaC07g41440 Brassica carinata
BolC2t08637H Brassica oleracea
BolC4t23667H Brassica oleracea
BolC4t23676H Brassica oleracea
BolC4t23680H Brassica oleracea
BolC4t26462H Brassica oleracea
BolC4t26464H Brassica oleracea
BolC4t26467H Brassica oleracea
BolC4t26469H Brassica oleracea
BolC5t30257H Brassica oleracea
BolC8t51953H Brassica oleracea
BolC9t57869H Brassica oleracea
BraA02t06615Z Brassica rapa
BraA03t11602Z Brassica rapa
BraA04t17118Z Brassica rapa
BraA04t17124Z Brassica rapa
BraA05t20508Z Brassica rapa
BraA06t24461Z Brassica rapa
BraA09t41429Z Brassica rapa
C02p25680 Brassica napus
C04p21420 Brassica napus
C04p21500 Brassica napus
C04p21540 Brassica napus
C04p21550 Brassica napus
C04p48730 Brassica napus
C04p48760 Brassica napus
C04p48780 Brassica napus
C04p48820 Brassica napus
C04p48840 Brassica napus
C05p13080 Brassica napus
C05p15480 Brassica napus
C08p44050 Brassica napus
CAN.G195.17 Capsicum annuum
CANSAT01G1906 Cannabis sativa
CANSAT25G0580 Cannabis sativa
CANSAT25G3058 Cannabis sativa
CARHR017670 Cardamine hirsuta
CARHR267110 Cardamine hirsuta
Carub.0001s1686 Capsella rubella
Carub.0004s1029 Capsella rubella
Carub.0005s0908 Capsella rubella
Carub.0005s0912 Capsella rubella
Carub.0005s0913 Capsella rubella
Ca_03393_v3 Cicer arietinum L.
Ca_11080_v3 Cicer arietinum L.
Ca_29680_v3 Cicer arietinum L.
CBR_g39242 Chara braunii
Cc05_g10330 Coffea canephora
CDE02G1097 Ceratophyllum demersum
Cfa000062 Carpinus fangiana
Cfa019526 Carpinus fangiana
Cfa019527 Carpinus fangiana
Cfa023865 Carpinus fangiana
Ciclev10013646m.g Citrus clementina
Ciclev10021131m.g Citrus clementina
Ciclev10027287m.g Citrus clementina
CiPaw.05G024500 Carya illinoinensis
CiPaw.07G066900 Carya illinoinensis
ClCG11G000460 Citrullus lanatus
COL.COLO4_15345 Corchorus olitorius
COL.COLO4_32957 Corchorus olitorius
Cpa.g.sc77.95 Carica papaya
Cre17.g741100 Chlamydomonas reinhardtii
CsaV3_5G014010 Cucumis sativus L.
CsaV3_UNG170320 Cucumis sativus L.
CSS0000884 Camellia sinensis var. sinensis
CSS0003794 Camellia sinensis var. sinensis
CSS0006094 Camellia sinensis var. sinensis
CSS0010425 Camellia sinensis var. sinensis
CSS0013480 Camellia sinensis var. sinensis
CSS0015685 Camellia sinensis var. sinensis
CSS0027580 Camellia sinensis var. sinensis
CSS0037022 Camellia sinensis var. sinensis
DCAR_019009 Daucus carota
DCAR_029474 Daucus carota
Dinv25522 Davidia involucrata
Dinv25523 Davidia involucrata
Dinv25524 Davidia involucrata
Dinv25553 Davidia involucrata
Dinv26668 Davidia involucrata
Dinv30815 Davidia involucrata
Dinv30818 Davidia involucrata
Duzib151G0763 Durio zibethinus
ECA236G3744 Erigeron canadensis
ECA238G1400 Erigeron canadensis
ECA247G1188 Erigeron canadensis
EL10Ac2g03269 Beta vulgaris
EL10Ac2g03608 Beta vulgaris
EL10Ac5g10817 Beta vulgaris
EL10Ac9g21447 Beta vulgaris
Eucgr.A01993 Eucalyptus grandis
Eucgr.D00113 Eucalyptus grandis
Eucgr.D00119 Eucalyptus grandis
Eucgr.D00122 Eucalyptus grandis
Eucgr.D00123 Eucalyptus grandis
Eucgr.D00136 Eucalyptus grandis
Eucgr.D00156 Eucalyptus grandis
Eucgr.D00164 Eucalyptus grandis
Eucgr.D01155 Eucalyptus grandis
Eucgr.E02387 Eucalyptus grandis
Eucgr.F03206 Eucalyptus grandis
FAN11G4027 Fragaria x ananassa
FAN16G1745 Fragaria x ananassa
FAN19G2615 Fragaria x ananassa
FAN21G0116 Fragaria x ananassa
FAN21G3406 Fragaria x ananassa
FAN25G0096 Fragaria x ananassa
FAN28G1716 Fragaria x ananassa
FvH4_1g15490 Fragaria vesca
FvH4_3g16590 Fragaria vesca
Glyma.13G259300 Glycine max
Glyma.14G142250 Glycine max
Glyma.15G248800 Glycine max
Gohir.A02G008200 Gossypium hirsutum
Gohir.A02G009750 Gossypium hirsutum
Gohir.D02G007900 Gossypium hirsutum
Gohir.D02G008200 Gossypium hirsutum
Gohir.D02G008400 Gossypium hirsutum
Gohir.D02G009950 Gossypium hirsutum
Gorai.005G009400 Gossypium raimondii
Gorai.005G010000 Gossypium raimondii
Gorai.005G016000 Gossypium raimondii
GSVIVG01005341001 Vitis vinifera
HanXRQChr03g0080951 Helianthus annuus
HanXRQChr03g0084281 Helianthus annuus
HanXRQChr04g0101771 Helianthus annuus
HanXRQChr04g0102131 Helianthus annuus
HanXRQChr04g0102141 Helianthus annuus
HanXRQChr04g0102611 Helianthus annuus
HanXRQChr11g0330271 Helianthus annuus
Haze_01580 Corylus avellana
Haze_09265 Corylus avellana
Haze_09269 Corylus avellana
Haze_13409 Corylus avellana
Hma1.2p1_1456F.1_g284610 Hydrangea macrophylla
HPP92_009963 Vanilla planifolia
Hund02319 Selenicereus undatus
Hund06891 Selenicereus undatus
Lalb_Chr20g0108951 Lupinus albus
Lalb_Chr25g0285411 Lupinus albus
Lj4g0014188 Lotus japonicus
Lj8A574G20 Lonicera japonica
Lj8A578G18 Lonicera japonica
Lj8C142T15 Lonicera japonica
Lju432A3G19 Lonicera japonica
Lju50A42G23 Lonicera japonica
Lsat_1_v5_gn_4_143101 Lactuca sativa
Lsat_1_v5_gn_6_103200 Lactuca sativa
Lsat_1_v5_gn_7_3521 Lactuca sativa
Manes.10G067400 Manihot esculenta
Mapoly0064s0067 Marchantia polymorpha
MBI10_g30417_MAGBIO Magnolia biondii
MCO15G593 Micromonas commoda
MD05G1208800 Malus domestica
MD10G1195300 Malus domestica
Medtr1g073720 Medicago truncatula
Medtr2g070740 Medicago truncatula
Medtr8g008730 Medicago truncatula
MELO3C000452.2 Cucumis melo
MELO3C001317.2 Cucumis melo
MELO3C026805.2 Cucumis melo
Migut.B00465 Erythranthe guttata
Migut.B00466 Erythranthe guttata
Migut.E01766 Erythranthe guttata
Migut.H00158 Erythranthe guttata
Migut.K00352 Erythranthe guttata
MSTRG.14277 Avicennia marina
Nitab4.5_0000231g0010 Nicotiana tabacum
Nitab4.5_0000288g0140 Nicotiana tabacum
Nitab4.5_0007734g0060 Nicotiana tabacum
Nitab4.5_0009273g0040 Nicotiana tabacum
Nitab4.5_0009273g0050 Nicotiana tabacum
Nn4g26574 Nelumbo nucifera
Nn5g29773 Nelumbo nucifera
Oeu006132.1 Olea europaea
Oeu006141.1 Olea europaea
Oeu009878.1 Olea europaea
Oeu026466.1 Olea europaea
Oeu036258.1 Olea europaea
Oeu042347.1 Olea europaea
Oeu049118.1 Olea europaea
Oeu054032.1 Olea europaea
Oeu054034.1 Olea europaea
Os01g0588600 Oryza sativa ssp. japonica
Os01g0588700 Oryza sativa ssp. japonica
Peaxi162Scf00174g10025 Petunia axillaris
Peaxi162Scf00213g01418 Petunia axillaris
Peaxi162Scf00213g01420 Petunia axillaris
PGR031G2584 Punica granatum
PGR083G0601 Punica granatum
PGSC0003DMG400029566 Solanum tuberosum
Phvul.005G060900 Phaseolus vulgaris
Potri.001G377800 Populus trichocarpa
Potri.011G096100 Populus trichocarpa
Pp3c23_13930 Physcomitrium patens
PRCOL_00002429 Prasinoderma coloniale
Prupe.1G288200 Prunus persica
Prupe.2G218500 Prunus persica
Prupe.3G160000 Prunus persica
Prupe.4G012700 Prunus persica
Prupe.4G015800 Prunus persica
Prupe.4G148700 Prunus persica
Psat0s1301g0040 Pisum sativum
PSO017G4999 Papaver somniferum
PSO063G7396 Papaver somniferum
PSO591G0112 Papaver somniferum
PSO782G4890 Papaver somniferum
QL04p041408 Quercus lobata
QL04p046156 Quercus lobata
QL04p046326 Quercus lobata
QL06p010852 Quercus lobata
QL06p037563 Quercus lobata
QL09p032443 Quercus lobata
QL11p013055 Quercus lobata
RcHm_v2.0_Chr5g0027661 Rosa chinensis
RcHm_v2.0_Chr7g0233381 Rosa chinensis
RcHm_v2.0_Chr7g0233401 Rosa chinensis
Rhsim05G0200300 Rhododendron simsii
Rhsim06G0185000 Rhododendron simsii
Sabra11G0089400 Salix brachista
Sabra11G0093000 Salix brachista
SalBow1G1323 Salvia bowleyana
Sc18g0004260 Simmondsia chinensis
Sed0002181 Sechium edule
Sed0011331 Sechium edule
Sed0016982 Sechium edule
SEGI_06027 Sequoiadendron giganteum
SEGI_15077 Sequoiadendron giganteum
SEGI_27076 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34231 Striga asiatica
SGA_v2.0_scaffold69G23327 Striga asiatica
SGA_v2.0_scaffold69G23328 Striga asiatica
SHI14910 Sapria himalayana
SMO367G0908 Selaginella moellendorffii
Solyc08g074420.3 Solanum lycopersicum
Sopen08g023070 Solanum pennellii
Sp1g15250 Schrenkiella parvula
TAR629G1564 Trochodendron aralioides
THA.LOC104808078 Tarenaya hassleriana
THA.LOC104813980 Tarenaya hassleriana
Thecc.04G163100 Theobroma cacao
Thhalv10007973m.g Eutrema salsugineum
Thhalv10017679m.g Eutrema salsugineum
TPR.G15705 Trifolium pratense
TPR.G22993 Trifolium pratense
TPR.G26605 Trifolium pratense
TWI73G0955 Tripterygium wilfordii
unitig_0.g2280 Utricularia gibba
vmacro10324 Vaccinium macrocarpon
vmacro12012 Vaccinium macrocarpon
vmacro12013 Vaccinium macrocarpon
vmacro12014 Vaccinium macrocarpon
VMungo0720G2051 Vigna mungo
Zm00001eb357410 Zea mays

User provided reference genes

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