Gene: Pp3c23_13930
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c23_13930
- Transcript Identifier Pp3c23_13930V3.4
- Gene Type Coding gene
- Location Chr23 : 9363668-9366497 : positive
Gene Family Information
- ID HOM05D002017
- #Genes/#Species 328/100
- Phylogenetic origin
- ID ORTHO05D002042
- #Genes/#Species 324/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c23_13930V3.4
- pacid 32949654
- alias Phypa_149326
- alias Phpat.023G047200
- alias Pp1s294_75V6
- uniprot A0A2K1IJA1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000349 | IEA | GOA Database | generation of catalytic spliceosome for first transesterification step | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0008380 | IBA IEA | GOA Database | RNA splicing | |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071006 | IBA IEA | GOA Database | U2-type catalytic step 1 spliceosome | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007590 | Saf4/Yju2 protein |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |