Gene: Solyc08g074420.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g074420.3
- Transcript Identifier Solyc08g074420.3.1
- Gene Type Coding gene
- Location SL4.0ch08 : 56654199-56659071 : positive
Gene Family Information
- ID HOM05D002017
- #Genes/#Species 328/100
- Phylogenetic origin
- ID ORTHO05D002042
- #Genes/#Species 324/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g074420.3.1
- uniprot A0A3Q7HSK3
- gene_id Solyc08g074420
Descriptions
- Description Coiled-coil domain-containing protein 94 (AHRD V3.3 *** A0A2G3DDE6_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000349 | IEA | GOA Database | generation of catalytic spliceosome for first transesterification step | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0008380 | IBA IEA | GOA Database | RNA splicing | |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071006 | IBA IEA | GOA Database | U2-type catalytic step 1 spliceosome | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007590 | Saf4/Yju2 protein |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |