Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09400 Brassica napus
A07p38510 Brassica napus
Aa31csc822G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.831 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2082 Anthoceros agrestis
Actinidia34925 Actinidia chinensis
Ah.01g011840 Amaranthus hybridus
Ah.02g118900 Amaranthus hybridus
Ah.06g195180 Amaranthus hybridus
Ah.10g027330 Amaranthus hybridus
Ah.10g027450 Amaranthus hybridus
Ah.10g027970 Amaranthus hybridus
Ah.10g028680 Amaranthus hybridus
Ah.10g028690 Amaranthus hybridus
Ah.10g028990 Amaranthus hybridus
AL1G67310 Arabidopsis lyrata
AL2G20540 Arabidopsis lyrata
AL2G21740 Arabidopsis lyrata
AL4G23360 Arabidopsis lyrata
AL5G20250 Arabidopsis lyrata
Aqoxy4G01609 Aquilegia oxysepala
Aqoxy5G00594 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JG1UT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.82YIJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5EGR1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E2JJBF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MWRF4M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T14CIR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea
AT2G28815 Arabidopsis thaliana
ATCG00790 Arabidopsis thaliana
ATMG00080 Arabidopsis thaliana
ATMG00090 Arabidopsis thaliana
ATR0424G001 Amborella trichopoda
ATR0620G114 Amborella trichopoda
ATR0661G567 Amborella trichopoda
Atru.chr11.441 Acer truncatum
BcaB03g14981 Brassica carinata
BcaC08g46689 Brassica carinata
BNapus_Darmor_BZH_scaffold_253p00360 Brassica napus
BolC6t39714H Brassica oleracea
BolSC28t60315H Brassica oleracea
BolSC28t60316H Brassica oleracea
BolSC28t60371H Brassica oleracea
BolSC29t60531H Brassica oleracea
BolSC29t60612H Brassica oleracea
BolSC29t60628H Brassica oleracea
BolSC35t60672H Brassica oleracea
BolSC35t60727H Brassica oleracea
BolSC49t61161H Brassica oleracea
BolSC56t61246H Brassica oleracea
BraA07t31411Z Brassica rapa
BraSC159t45730Z Brassica rapa
BraSC48t46240Z Brassica rapa
BraSC48t46330Z Brassica rapa
BraSC48t46331Z Brassica rapa
BraSC54t46368Z Brassica rapa
BraSC58t46443Z Brassica rapa
C03p38120 Brassica napus
C06p46690 Brassica napus
CAN.G1202.8 Capsicum annuum
CAN.G1542.10 Capsicum annuum
CANSAT16G0046 Cannabis sativa
CARHR127990 Cardamine hirsuta
CARHR282630 Cardamine hirsuta
CARHR287450 Cardamine hirsuta
CARHR288240 Cardamine hirsuta
Carub.0004s0981 Capsella rubella
Ca_30750_v3 Cicer arietinum L.
CDE02G0251 Ceratophyllum demersum
CDE02G0755 Ceratophyllum demersum
Cfa023008 Carpinus fangiana
Cfa025269 Carpinus fangiana
Ciclev10004001m.g Citrus clementina
Ciclev10013231m.g Citrus clementina
Ciclev10021160m.g Citrus clementina
Ciclev10024383m.g Citrus clementina
CiPaw.01G253800 Carya illinoinensis
CiPaw.03G280800 Carya illinoinensis
ClCG00G004300 Citrullus lanatus
ClCG08G009700 Citrullus lanatus
ClCG08G015640 Citrullus lanatus
ClCG11G014310 Citrullus lanatus
Cpa.g.sc1367.1 Carica papaya
Cre06.g278224 Chlamydomonas reinhardtii
CsaV3_UNG208600 Cucumis sativus L.
DCAR_032447 Daucus carota
DCAR_032448 Daucus carota
DCAR_032523 Daucus carota
Dinv06676 Davidia involucrata
Dinv35896 Davidia involucrata
ECA236G3336 Erigeron canadensis
ECA240G1514 Erigeron canadensis
EL10Ac1g01304 Beta vulgaris
EL10Ac4g10036 Beta vulgaris
EL10Ac5g11671 Beta vulgaris
EL10Ac5g12759 Beta vulgaris
EL10As12g24036 Beta vulgaris
Eucgr.A01256 Eucalyptus grandis
Eucgr.H02719 Eucalyptus grandis
Eucgr.J02744 Eucalyptus grandis
FAN11G2273 Fragaria x ananassa
FAN16G3148 Fragaria x ananassa
FAN21G1218 Fragaria x ananassa
FAN25G2706 Fragaria x ananassa
FvH4_3g18440 Fragaria vesca
Gohir.1Z049902 Gossypium hirsutum
Gohir.1Z049934 Gossypium hirsutum
Gohir.A03G162750 Gossypium hirsutum
Gohir.A05G144450 Gossypium hirsutum
Gohir.A05G396300 Gossypium hirsutum
Gohir.A12G024600 Gossypium hirsutum
Gohir.A12G178655 Gossypium hirsutum
Gohir.A13G113500 Gossypium hirsutum
Gohir.D01G102151 Gossypium hirsutum
Gohir.D01G121380 Gossypium hirsutum
Gohir.D01G157901 Gossypium hirsutum
Gohir.D08G014666 Gossypium hirsutum
Gohir.D09G095250 Gossypium hirsutum
Gohir.D12G072201 Gossypium hirsutum
Gorai.001G161500 Gossypium raimondii
Gorai.002G152200 Gossypium raimondii
Gorai.002G196000 Gossypium raimondii
Gorai.004G166700 Gossypium raimondii
Gorai.008G079300 Gossypium raimondii
HanXRQChr00c0349g0573951 Helianthus annuus
HanXRQChr00c0557g0575721 Helianthus annuus
HanXRQChr00c0593g0576391 Helianthus annuus
HanXRQChr01g0013341 Helianthus annuus
HanXRQChr01g0013351 Helianthus annuus
HanXRQChr01g0020191 Helianthus annuus
HanXRQChr04g0127461 Helianthus annuus
HanXRQChr05g0147721 Helianthus annuus
HanXRQChr05g0152551 Helianthus annuus
HanXRQChr06g0172541 Helianthus annuus
HanXRQChr10g0284411 Helianthus annuus
HanXRQChr10g0318031 Helianthus annuus
HanXRQChr11g0321121 Helianthus annuus
HanXRQChr11g0326991 Helianthus annuus
HanXRQChr11g0345301 Helianthus annuus
HanXRQChr12g0369881 Helianthus annuus
HanXRQChr14g0433081 Helianthus annuus
HanXRQChr15g0486801 Helianthus annuus
HanXRQChr16g0504311 Helianthus annuus
HanXRQChr16g0530211 Helianthus annuus
HanXRQChr17g0554541 Helianthus annuus
HanXRQCPg0580211 Helianthus annuus
HanXRQMTg0579601 Helianthus annuus
Haze_07953 Corylus avellana
Haze_16657 Corylus avellana
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla
Hund04058 Selenicereus undatus
Hund08207 Selenicereus undatus
Hund10099 Selenicereus undatus
Hund12658 Selenicereus undatus
Hund26845 Selenicereus undatus
Hund27846 Selenicereus undatus
Hund28045 Selenicereus undatus
Hund28418 Selenicereus undatus
Hund29038 Selenicereus undatus
Hund29684 Selenicereus undatus
Hund29734 Selenicereus undatus
Hund29823 Selenicereus undatus
Hund30343 Selenicereus undatus
Hund30390 Selenicereus undatus
Hund30392 Selenicereus undatus
Hund30419 Selenicereus undatus
Hund30965 Selenicereus undatus
Hund31335 Selenicereus undatus
Lalb_Chr00c21g0405751 Lupinus albus
Lalb_Chr00c24g0407071 Lupinus albus
Lalb_Chr03g0039341 Lupinus albus
Lalb_Chr11g0070091 Lupinus albus
Lalb_Chr11g0070101 Lupinus albus
Lalb_Chr11g0070921 Lupinus albus
Lalb_Chr13g0291611 Lupinus albus
Lalb_Chr18g0049321 Lupinus albus
Lalb_Chr19g0127771 Lupinus albus
Lalb_Chr23g0274251 Lupinus albus
Lj2C1237T35 Lonicera japonica
Lj2P1221T93 Lonicera japonica
Lj2P1230T111 Lonicera japonica
LjContig00315g0000313 Lotus japonicus
LjContig00318g0015359 Lotus japonicus
Lsat_1_v5_gn_0_38040 Lactuca sativa
Lsat_1_v5_gn_4_106021 Lactuca sativa
Lsat_1_v5_gn_4_178801 Lactuca sativa
Lsat_1_v5_gn_8_132861 Lactuca sativa
Lsat_1_v5_gn_8_92120 Lactuca sativa
Mapoly0052s0079 Marchantia polymorpha
Mapoly0118s0046 Marchantia polymorpha
MBI05_g05348_MAGBIO Magnolia biondii
MBI16_g09478_MAGBIO Magnolia biondii
MD06G1012400 Malus domestica
Medtr0002s0780 Medicago truncatula
Medtr0702s0030 Medicago truncatula
Medtr1779s0010 Medicago truncatula
Medtr2g087560 Medicago truncatula
Medtr4g034750 Medicago truncatula
Medtr8g081460 Medicago truncatula
MELO3C000108.2 Cucumis melo
MELO3C028575.2 Cucumis melo
Migut.D01329 Erythranthe guttata
Nitab4.5_0000216g0140 Nicotiana tabacum
Nitab4.5_0000309g0180 Nicotiana tabacum
Nitab4.5_0000309g0190 Nicotiana tabacum
Nitab4.5_0000309g0210 Nicotiana tabacum
Nitab4.5_0000309g0220 Nicotiana tabacum
Nitab4.5_0000330g0070 Nicotiana tabacum
Nitab4.5_0000334g0030 Nicotiana tabacum
Nitab4.5_0000334g0040 Nicotiana tabacum
Nitab4.5_0000451g0190 Nicotiana tabacum
Nitab4.5_0001153g0110 Nicotiana tabacum
Nitab4.5_0001761g0040 Nicotiana tabacum
Nitab4.5_0002589g0040 Nicotiana tabacum
Nitab4.5_0002616g0170 Nicotiana tabacum
Nitab4.5_0007104g0030 Nicotiana tabacum
Nitab4.5_0007876g0050 Nicotiana tabacum
Nitab4.5_0007962g0010 Nicotiana tabacum
Nitab4.5_0009561g0020 Nicotiana tabacum
Nitab4.5_0009561g0030 Nicotiana tabacum
Nitab4.5_0009703g0120 Nicotiana tabacum
Nitab4.5_0010033g0070 Nicotiana tabacum
Nitab4.5_0011784g0040 Nicotiana tabacum
Nn002s41363 Nelumbo nucifera
Nn021s41520 Nelumbo nucifera
Nn070s42373 Nelumbo nucifera
Nn1g01958 Nelumbo nucifera
Nn1g10074 Nelumbo nucifera
Os11g0269100 Oryza sativa ssp. japonica
Peaxi162Scf00084g00915 Petunia axillaris
Peaxi162Scf00238g00149 Petunia axillaris
Peaxi162Scf00360g00814 Petunia axillaris
Peaxi162Scf00360g00815 Petunia axillaris
Peaxi162Scf00934g00143 Petunia axillaris
Peaxi162Scf01098g00013 Petunia axillaris
PGR111G0010 Punica granatum
PGSC0003DMG400013869 Solanum tuberosum
PGSC0003DMG400030936 Solanum tuberosum
PGSC0003DMG400042640 Solanum tuberosum
Pp3c2_23477 Physcomitrium patens
Pp3c2_23480 Physcomitrium patens
Psat0s1446g0200 Pisum sativum
Psat0s406g0040 Pisum sativum
Psat1g091000 Pisum sativum
Psat3g190880 Pisum sativum
Psat5g096040 Pisum sativum
Psat6g191040 Pisum sativum
Psat7g012480 Pisum sativum
PSO541G5803 Papaver somniferum
PSO548G0086 Papaver somniferum
PSO675G5335 Papaver somniferum
PSO675G5880 Papaver somniferum
PSO675G6514 Papaver somniferum
QL07p023375 Quercus lobata
QL93p1043_0023 Quercus lobata
RcHm_v2.0_Chr2g0118571 Rosa chinensis
RcHm_v2.0_Chr5g0031171 Rosa chinensis
RcHm_v2.0_MTg0498421 Rosa chinensis
RhsimMtG0002600 Rhododendron simsii
SabraMtG0007200 Salix brachista
SalBow1G3504 Salvia bowleyana
SalBow1G4210 Salvia bowleyana
SalBow6G6095 Salvia bowleyana
Sc17g0003730 Simmondsia chinensis
Sc25g0002060 Simmondsia chinensis
Sed0005999 Sechium edule
Sed0015467 Sechium edule
SEGI_15837 Sequoiadendron giganteum
SEGI_15868 Sequoiadendron giganteum
SEGI_19238 Sequoiadendron giganteum
SEGI_40200 Sequoiadendron giganteum
SGA_v2.0_scaffold245G44435 Striga asiatica
SGA_v2.0_scaffold255G45472 Striga asiatica
SGA_v2.0_scaffold324G48665 Striga asiatica
SGA_v2.0_scaffold3325G54315 Striga asiatica
SGA_v2.0_scaffold339G49282 Striga asiatica
SHI01961 Sapria himalayana
SHI01963 Sapria himalayana
SHI01964 Sapria himalayana
SHI07819 Sapria himalayana
SHI11170 Sapria himalayana
SHI11171 Sapria himalayana
SHI20096 Sapria himalayana
SHI29633 Sapria himalayana
SMO059G0001 Selaginella moellendorffii
SMO086G0056 Selaginella moellendorffii
SMO172G0196 Selaginella moellendorffii
Solyc00g500032.1 Solanum lycopersicum
Solyc00g500077.1 Solanum lycopersicum
Solyc00g500100.1 Solanum lycopersicum
Solyc00g500117.1 Solanum lycopersicum
Solyc00g500154.1 Solanum lycopersicum
Solyc00g500245.1 Solanum lycopersicum
Solyc00g500274.1 Solanum lycopersicum
Solyc00g500309.1 Solanum lycopersicum
Solyc03g063770.3 Solanum lycopersicum
Solyc05g045770.1 Solanum lycopersicum
Solyc05g045780.1 Solanum lycopersicum
Solyc05g045822.1 Solanum lycopersicum
Solyc05g045824.1 Solanum lycopersicum
Solyc05g045826.1 Solanum lycopersicum
Solyc05g045828.1 Solanum lycopersicum
Solyc05g045840.1 Solanum lycopersicum
Solyc05g045920.1 Solanum lycopersicum
Solyc06g008140.1 Solanum lycopersicum
Solyc08g045870.3 Solanum lycopersicum
Solyc08g074700.1 Solanum lycopersicum
Solyc09g015850.4 Solanum lycopersicum
Solyc09g015860.1 Solanum lycopersicum
Solyc09g050065.1 Solanum lycopersicum
Solyc10g006910.3 Solanum lycopersicum
Solyc12g035815.1 Solanum lycopersicum
Solyc12g035820.3 Solanum lycopersicum
Solyc12g038985.1 Solanum lycopersicum
Sopen05g027050 Solanum pennellii
Sopen05g027070 Solanum pennellii
Sopen08g010250 Solanum pennellii
Sopen10g002820 Solanum pennellii
Sp3g25720 Schrenkiella parvula
TAR358G0001 Trochodendron aralioides
TAR365G0637 Trochodendron aralioides
TAR375G0860 Trochodendron aralioides
Thhalv10001268m.g Eutrema salsugineum
Thhalv10018971m.g Eutrema salsugineum
TPR.G21771 Trifolium pratense
TPR.G26049 Trifolium pratense
unitig_87.g28029 Utricularia gibba
unitig_91.g26513 Utricularia gibba

User provided reference genes

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