Gene: Solyc12g038985.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g038985.1
- Transcript Identifier Solyc12g038985.1.1
- Gene Type Coding gene
- Location SL4.0ch12 : 51373703-51377646 : positive
Gene Family Information
- ID HOM05D001987
- #Genes/#Species 333/77
- Phylogenetic origin
- ID ORTHO05D006514
- #Genes/#Species 142/56
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc12g038985.1.1
- gene_id Solyc12g038985
Descriptions
- Description Ribosomal protein S3 (AHRD V3.3 *-* A0A290WKX3_SOLLC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006412 | IEA | InterPro | translation | |
GO:0022900 | IEA | InterPro | electron transport chain |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
GO:0019843 | IEA | InterPro | rRNA binding | |
GO:0004129 | IEA | InterPro | cytochrome-c oxidase activity | |
GO:0005507 | IEA | InterPro | copper ion binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005840 | IEA | InterPro | ribosome | |
GO:0016021 | IEA | InterPro | integral component of membrane | |
GO:0016020 | IEA | InterPro | membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR008972 | Cupredoxin |
IPR001351 | Ribosomal protein S3, C-terminal |
IPR016180 | Ribosomal protein L10e/L16 |
IPR036920 | Ribosomal protein L10e/L16 superfamily |
IPR036419 | Ribosomal protein S3, C-terminal domain superfamily |
IPR000114 | Ribosomal protein L16 |
IPR044954 | Ribosomal protein S3, mitochondrial, plant |
IPR011759 | Cytochrome C oxidase subunit II, transmembrane domain |
IPR002429 | Cytochrome c oxidase subunit II-like C-terminal |
IPR036257 | Cytochrome C oxidase subunit II, transmembrane domain superfamily |
Mapman id | Description |
---|---|
17.7.1.1.15 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL16 |