Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p26260 Brassica napus
A08p30170 Brassica napus
A09p55130 Brassica napus
A09p55140 Brassica napus
Aa31LG10G17320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.496 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.497 Anthoceros agrestis
Actinidia06286 Actinidia chinensis
Actinidia19428 Actinidia chinensis
Actinidia20655 Actinidia chinensis
Actinidia21535 Actinidia chinensis
Ah.03g145440 Amaranthus hybridus
Ah.10g038540 Amaranthus hybridus
Ah.16g100700 Amaranthus hybridus
AL1G31350 Arabidopsis lyrata
AL5G46320 Arabidopsis lyrata
Aqoxy2G04178 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18AW2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IVGB5U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T8W0FC Arachis hypogaea
AT1G18830 Arabidopsis thaliana
AT3G63460 Arabidopsis thaliana
ATR0057G059 Amborella trichopoda
ATR0057G085 Amborella trichopoda
ATR0057G108 Amborella trichopoda
Atru.chr11.2543 Acer truncatum
AUR62009426 Chenopodium quinoa
AUR62009427 Chenopodium quinoa
AUR62023105 Chenopodium quinoa
BcaB02g08058 Brassica carinata
BcaB02g11296 Brassica carinata
BcaB03g12953 Brassica carinata
BcaC07g38951 Brassica carinata
BcaC07g40813 Brassica carinata
BcaC08g45262 Brassica carinata
BolC4t24517H Brassica oleracea
BolC6t38032H Brassica oleracea
BolC8t49521H Brassica oleracea
BolC8t51381H Brassica oleracea
BraA07t30269Z Brassica rapa
BraA08t34951Z Brassica rapa
BraA09t40920Z Brassica rapa
BraA09t40921Z Brassica rapa
C04p29860 Brassica napus
C06p28640 Brassica napus
C08p18950 Brassica napus
C08p38070 Brassica napus
CAN.G909.18 Capsicum annuum
CANSAT80G0138 Cannabis sativa
CARHR040110 Cardamine hirsuta
CARHR291510 Cardamine hirsuta
Carub.0001s1846 Capsella rubella
Carub.0005s3007 Capsella rubella
Ca_26319_v3 Cicer arietinum L.
Ca_29948_v3 Cicer arietinum L.
CBR_g4546 Chara braunii
Cc00_g06050 Coffea canephora
CDE02G0774 Ceratophyllum demersum
CDE09G0202 Ceratophyllum demersum
Cfa010789 Carpinus fangiana
Cfa010830 Carpinus fangiana
Cfa022633 Carpinus fangiana
Cfa025337 Carpinus fangiana
Ciclev10030570m.g Citrus clementina
CiPaw.13G008500 Carya illinoinensis
CiPaw.14G004000 Carya illinoinensis
ClCG10G012130 Citrullus lanatus
COL.COLO4_03678 Corchorus olitorius
COL.COLO4_09444 Corchorus olitorius
COL.COLO4_11232 Corchorus olitorius
COL.COLO4_12328 Corchorus olitorius
COL.COLO4_12598 Corchorus olitorius
COL.COLO4_14640 Corchorus olitorius
COL.COLO4_18389 Corchorus olitorius
COL.COLO4_23246 Corchorus olitorius
Cpa.g.sc125.58 Carica papaya
Cpa.g.sc125.59 Carica papaya
Cpa.g.sc174.1 Carica papaya
Cpa.g.sc174.4 Carica papaya
Cpa.g.sc174.8 Carica papaya
Cre12.g522450 Chlamydomonas reinhardtii
CsaV3_3G031890 Cucumis sativus L.
CSS0022031 Camellia sinensis var. sinensis
CSS0034960 Camellia sinensis var. sinensis
DCAR_022370 Daucus carota
DCAR_031813 Daucus carota
Dinv01996 Davidia involucrata
Dinv02869 Davidia involucrata
Dinv07425 Davidia involucrata
Dinv07789 Davidia involucrata
Dinv15066 Davidia involucrata
Dinv31781 Davidia involucrata
Dinv37732 Davidia involucrata
Dinv43400 Davidia involucrata
Duzib133G0356 Durio zibethinus
Duzib138G1653 Durio zibethinus
Duzib268G1826 Durio zibethinus
ECA234G3788 Erigeron canadensis
ECA236G3334 Erigeron canadensis
ECA248G0101 Erigeron canadensis
ECA248G1610 Erigeron canadensis
EL10Ac2g04382 Beta vulgaris
Eucgr.G03281 Eucalyptus grandis
FAN01G0983 Fragaria x ananassa
FAN03G2968 Fragaria x ananassa
FAN06G2010 Fragaria x ananassa
FAN06G2210 Fragaria x ananassa
FAN10G1732 Fragaria x ananassa
FAN10G3290 Fragaria x ananassa
FvH4_7g01850 Fragaria vesca
FvH4_7g01880 Fragaria vesca
Glyma.09G226400 Glycine max
Glyma.12G010300 Glycine max
Gohir.A08G055600 Gossypium hirsutum
Gohir.A08G141300 Gossypium hirsutum
Gohir.A11G073600 Gossypium hirsutum
Gohir.A12G100200 Gossypium hirsutum
Gohir.D08G064900 Gossypium hirsutum
Gohir.D08G162400 Gossypium hirsutum
Gohir.D11G078201 Gossypium hirsutum
Gohir.D12G103000 Gossypium hirsutum
Gorai.004G067200 Gossypium raimondii
Gorai.004G168700 Gossypium raimondii
Gorai.007G083600 Gossypium raimondii
Gorai.008G112200 Gossypium raimondii
GSVIVG01001441001 Vitis vinifera
HanXRQChr01g0015661 Helianthus annuus
HanXRQChr06g0183381 Helianthus annuus
HanXRQChr16g0524831 Helianthus annuus
Haze_03128 Corylus avellana
Haze_03129 Corylus avellana
Haze_03191 Corylus avellana
Hma1.2p1_0685F.1_g203310 Hydrangea macrophylla
HPP92_001385 Vanilla planifolia
HPP92_001386 Vanilla planifolia
Hund16631 Selenicereus undatus
Lalb_Chr01g0000521 Lupinus albus
Lalb_Chr03g0024131 Lupinus albus
Lalb_Chr19g0140221 Lupinus albus
Lj3g0007867 Lotus japonicus
Lj3g0020634 Lotus japonicus
Lj7C575G6 Lonicera japonica
Lj9A642G52 Lonicera japonica
Lj9A642T48 Lonicera japonica
LjContig00016g0007772 Lotus japonicus
LjContig00095g0022524 Lotus japonicus
Lsat_1_v5_gn_1_101701 Lactuca sativa
Lsat_1_v5_gn_4_32040 Lactuca sativa
Lsat_1_v5_gn_5_28021 Lactuca sativa
Manes.07G011900 Manihot esculenta
Manes.10G135100 Manihot esculenta
Mapoly0156s0008 Marchantia polymorpha
MBI13_g11939_MAGBIO Magnolia biondii
MBI19_g16674_MAGBIO Magnolia biondii
MCO04G256 Micromonas commoda
MCO15G626 Micromonas commoda
MD02G1300000 Malus domestica
MD07G1024900 Malus domestica
Medtr4g045577 Medicago truncatula
MELO3C024002.2 Cucumis melo
MELO3C029574.2 Cucumis melo
MELO3C029961.2 Cucumis melo
Migut.B01256 Erythranthe guttata
MSTRG.17003 Avicennia marina
MSTRG.20555 Avicennia marina
MSTRG.28045 Avicennia marina
MSTRG.28046 Avicennia marina
Nitab4.5_0002888g0010 Nicotiana tabacum
Nitab4.5_0006695g0020 Nicotiana tabacum
Nn2g15171 Nelumbo nucifera
Nn5g28884 Nelumbo nucifera
Nn7g36348 Nelumbo nucifera
Oeu006547.2 Olea europaea
Oeu014599.1 Olea europaea
Os07g0657200 Oryza sativa ssp. japonica
Peaxi162Scf01108g00213 Petunia axillaris
PGR031G1837 Punica granatum
Phvul.011G010400 Phaseolus vulgaris
Potri.001G260900 Populus trichocarpa
Potri.009G055400 Populus trichocarpa
Pp3c1_29660 Physcomitrium patens
Pp3c2_17710 Physcomitrium patens
PRCOL_00000886 Prasinoderma coloniale
Prupe.2G024600 Prunus persica
Psat5g216200 Pisum sativum
Psat6g024720 Pisum sativum
Psat7g013920 Pisum sativum
Psat7g158440 Pisum sativum
PSO675G4117 Papaver somniferum
PSO732G0135 Papaver somniferum
PSO764G0154 Papaver somniferum
QL04p000034 Quercus lobata
QL04p000036 Quercus lobata
QL04p003183 Quercus lobata
QL04p010499 Quercus lobata
QL04p043590 Quercus lobata
QL06p019642 Quercus lobata
QL06p052472 Quercus lobata
RcHm_v2.0_Chr1g0318481 Rosa chinensis
Rhsim01G0124800 Rhododendron simsii
Rhsim02G0169400 Rhododendron simsii
Rhsim02G0201000 Rhododendron simsii
Rhsim07G0059400 Rhododendron simsii
Rhsim07G0060400 Rhododendron simsii
Rhsim07G0127800 Rhododendron simsii
RhsimUnG0082500 Rhododendron simsii
RhsimUnG0246200 Rhododendron simsii
Sabra09G0040500 Salix brachista
Sabra16G0159500 Salix brachista
Sabra19G0134500 Salix brachista
SalBow5G1268 Salvia bowleyana
SalBow5G4104 Salvia bowleyana
SalBow6G2677 Salvia bowleyana
SalBow6G7160 Salvia bowleyana
Sc11g0009020 Simmondsia chinensis
Sc14g0004930 Simmondsia chinensis
Sed0014499 Sechium edule
Sed0016255 Sechium edule
SEGI_00489 Sequoiadendron giganteum
SEGI_01457 Sequoiadendron giganteum
SEGI_01798 Sequoiadendron giganteum
SEGI_01925 Sequoiadendron giganteum
SEGI_02605 Sequoiadendron giganteum
SEGI_03631 Sequoiadendron giganteum
SEGI_03654 Sequoiadendron giganteum
SEGI_05034 Sequoiadendron giganteum
SEGI_05096 Sequoiadendron giganteum
SEGI_05972 Sequoiadendron giganteum
SEGI_06593 Sequoiadendron giganteum
SEGI_06746 Sequoiadendron giganteum
SEGI_06902 Sequoiadendron giganteum
SEGI_07277 Sequoiadendron giganteum
SEGI_08237 Sequoiadendron giganteum
SEGI_10197 Sequoiadendron giganteum
SEGI_10322 Sequoiadendron giganteum
SEGI_11628 Sequoiadendron giganteum
SEGI_11806 Sequoiadendron giganteum
SEGI_12407 Sequoiadendron giganteum
SEGI_13967 Sequoiadendron giganteum
SEGI_14216 Sequoiadendron giganteum
SEGI_14739 Sequoiadendron giganteum
SEGI_16606 Sequoiadendron giganteum
SEGI_16854 Sequoiadendron giganteum
SEGI_18252 Sequoiadendron giganteum
SEGI_19899 Sequoiadendron giganteum
SEGI_20911 Sequoiadendron giganteum
SEGI_21129 Sequoiadendron giganteum
SEGI_21503 Sequoiadendron giganteum
SEGI_22466 Sequoiadendron giganteum
SEGI_23463 Sequoiadendron giganteum
SEGI_25759 Sequoiadendron giganteum
SEGI_26506 Sequoiadendron giganteum
SEGI_27306 Sequoiadendron giganteum
SEGI_28955 Sequoiadendron giganteum
SEGI_29278 Sequoiadendron giganteum
SEGI_29625 Sequoiadendron giganteum
SEGI_31101 Sequoiadendron giganteum
SEGI_32956 Sequoiadendron giganteum
SEGI_34343 Sequoiadendron giganteum
SEGI_34610 Sequoiadendron giganteum
SEGI_35150 Sequoiadendron giganteum
SEGI_36195 Sequoiadendron giganteum
SEGI_36549 Sequoiadendron giganteum
SEGI_37080 Sequoiadendron giganteum
SEGI_37446 Sequoiadendron giganteum
SEGI_38764 Sequoiadendron giganteum
SEGI_38798 Sequoiadendron giganteum
SEGI_39250 Sequoiadendron giganteum
SEGI_39515 Sequoiadendron giganteum
SEGI_39557 Sequoiadendron giganteum
SEGI_40015 Sequoiadendron giganteum
SEGI_40257 Sequoiadendron giganteum
SEGI_40587 Sequoiadendron giganteum
SEGI_40822 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32768 Striga asiatica
SGA_v2.0_scaffold4G02473 Striga asiatica
SGA_v2.0_scaffold5G02944 Striga asiatica
SMO347G0508 Selaginella moellendorffii
Solyc01g088020.3 Solanum lycopersicum
Sopen01g034910 Solanum pennellii
Sp1g16800 Schrenkiella parvula
Sp5g00090 Schrenkiella parvula
TAR369G0424 Trochodendron aralioides
TAR633G0096 Trochodendron aralioides
TAR633G1125 Trochodendron aralioides
TAR636G2630 Trochodendron aralioides
THA.LOC104801971 Tarenaya hassleriana
THA.LOC104823030 Tarenaya hassleriana
Thecc.01G404200 Theobroma cacao
Thhalv10005758m.g Eutrema salsugineum
TPR.G10118 Trifolium pratense
TPR.G10129 Trifolium pratense
TPR.G1017 Trifolium pratense
TPR.G11102 Trifolium pratense
TPR.G11103 Trifolium pratense
TPR.G20258 Trifolium pratense
TPR.G21296 Trifolium pratense
TPR.G2570 Trifolium pratense
TPR.G28098 Trifolium pratense
TPR.G2961 Trifolium pratense
TPR.G2990 Trifolium pratense
TPR.G30307 Trifolium pratense
TPR.G30308 Trifolium pratense
TPR.G3035 Trifolium pratense
TPR.G3036 Trifolium pratense
TPR.G3047 Trifolium pratense
TPR.G3088 Trifolium pratense
TPR.G33922 Trifolium pratense
TPR.G35927 Trifolium pratense
TPR.G398 Trifolium pratense
TPR.G40633 Trifolium pratense
TPR.G4596 Trifolium pratense
TPR.G5183 Trifolium pratense
TPR.G8347 Trifolium pratense
TPR.G8350 Trifolium pratense
TWI09G1049 Tripterygium wilfordii
TWI53G0392 Tripterygium wilfordii
TWI73G0465 Tripterygium wilfordii
vmacro10496 Vaccinium macrocarpon
vmacro13704 Vaccinium macrocarpon
vmacro21140 Vaccinium macrocarpon
vmacro21141 Vaccinium macrocarpon
VMungo1127G0961 Vigna mungo
Zm00001eb015590 Zea mays
Zm00001eb020490 Zea mays
Zm00001eb060450 Zea mays
Zm00001eb110650 Zea mays
Zm00001eb235780 Zea mays
Zm00001eb237540 Zea mays
Zm00001eb280190 Zea mays
Zm00001eb306690 Zea mays
Zm00001eb329590 Zea mays
Zm00001eb360240 Zea mays
Zm00001eb442830 Zea mays

User provided reference genes

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