Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03270 Brassica napus
A06p34140 Brassica napus
A07p03930 Brassica napus
A09p11210 Brassica napus
Aa31LG8G14570 Aethionema arabicum
Actinidia17375 Actinidia chinensis
Actinidia17377 Actinidia chinensis
Actinidia17378 Actinidia chinensis
Actinidia17380 Actinidia chinensis
Actinidia17381 Actinidia chinensis
Actinidia18003 Actinidia chinensis
Actinidia20567 Actinidia chinensis
Actinidia22907 Actinidia chinensis
Actinidia22908 Actinidia chinensis
Actinidia28742 Actinidia chinensis
Actinidia35679 Actinidia chinensis
Ah.01g023720 Amaranthus hybridus
AL3G50050 Arabidopsis lyrata
AL3G50060 Arabidopsis lyrata
Aqoxy5G01032 Aquilegia oxysepala
Aqoxy6G01689 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4G73DJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IUYP8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JPCM7H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0RRHQ Arachis hypogaea
AT2G17190 Arabidopsis thaliana
AT2G17200 Arabidopsis thaliana
ATR0661G083 Amborella trichopoda
Atru.chr3.963 Acer truncatum
Atru.chr3.975 Acer truncatum
Atru.chr5.3550 Acer truncatum
Atru.chr5.3551 Acer truncatum
Atru.chr5.3552 Acer truncatum
AUR62011703 Chenopodium quinoa
AUR62012926 Chenopodium quinoa
BcaB03g16466 Brassica carinata
BcaB08g34708 Brassica carinata
BcaC01g02943 Brassica carinata
BcaC04g22989 Brassica carinata
BcaC06g36227 Brassica carinata
BcaNung00611 Brassica carinata
BolC1t00352H Brassica oleracea
BolC3t18079H Brassica oleracea
BolC7t41044H Brassica oleracea
BolC9t54219H Brassica oleracea
BraA01t00312Z Brassica rapa
BraA06t26347Z Brassica rapa
BraA07t28185Z Brassica rapa
BraA09t36764Z Brassica rapa
C01p03620 Brassica napus
C03p58050 Brassica napus
C07p06270 Brassica napus
C09p13260 Brassica napus
CAN.G1159.17 Capsicum annuum
CAN.G1159.18 Capsicum annuum
CAN.G1159.20 Capsicum annuum
CAN.G325.4 Capsicum annuum
CAN.G354.18 Capsicum annuum
CAN.G890.80 Capsicum annuum
CANSAT25G0497 Cannabis sativa
CARHR293500 Cardamine hirsuta
Carub.0003s3113 Capsella rubella
Carub.0003s3114 Capsella rubella
Ca_03463_v3 Cicer arietinum L.
Ca_19784_v3 Cicer arietinum L.
Ca_22419_v3 Cicer arietinum L.
Ca_24968_v3 Cicer arietinum L.
Ca_27144_v3 Cicer arietinum L.
Ca_27832_v3 Cicer arietinum L.
CBR_g54797 Chara braunii
Cc07_g11700 Coffea canephora
CDE02G2418 Ceratophyllum demersum
CDE04G0090 Ceratophyllum demersum
CDE05G0952 Ceratophyllum demersum
CDE05G1971 Ceratophyllum demersum
Cfa005350 Carpinus fangiana
Cfa007067 Carpinus fangiana
Ciclev10025307m.g Citrus clementina
CiPaw.05G091600 Carya illinoinensis
CiPaw.06G116600 Carya illinoinensis
CiPaw.06G116700 Carya illinoinensis
CiPaw.06G116800 Carya illinoinensis
ClCG02G003510 Citrullus lanatus
ClCG10G000310 Citrullus lanatus
COL.COLO4_17934 Corchorus olitorius
COL.COLO4_22541 Corchorus olitorius
Cpa.g.sc20.203 Carica papaya
Cpa.g.sc535.2 Carica papaya
Cre15.g637100 Chlamydomonas reinhardtii
CsaV3_3G000340 Cucumis sativus L.
CsaV3_7G001800 Cucumis sativus L.
CSS0000110 Camellia sinensis var. sinensis
CSS0003873 Camellia sinensis var. sinensis
CSS0009793 Camellia sinensis var. sinensis
CSS0012957 Camellia sinensis var. sinensis
CSS0014969 Camellia sinensis var. sinensis
CSS0017645 Camellia sinensis var. sinensis
CSS0019927 Camellia sinensis var. sinensis
CSS0027119 Camellia sinensis var. sinensis
CSS0039636 Camellia sinensis var. sinensis
CSS0049443 Camellia sinensis var. sinensis
DCAR_006288 Daucus carota
DCAR_009534 Daucus carota
DCAR_015664 Daucus carota
Dinv08525 Davidia involucrata
Dinv14164 Davidia involucrata
Dinv14671 Davidia involucrata
Dinv41880 Davidia involucrata
Duzib052G0080 Durio zibethinus
Duzib132G0855 Durio zibethinus
Duzib147G0366 Durio zibethinus
Duzib187G0987 Durio zibethinus
Duzib248G1388 Durio zibethinus
ECA246G0818 Erigeron canadensis
EL10Ac9g21246 Beta vulgaris
Eucgr.G01858 Eucalyptus grandis
Eucgr.I01516 Eucalyptus grandis
Eucgr.L02668 Eucalyptus grandis
FAN15G2394 Fragaria x ananassa
FAN19G3220 Fragaria x ananassa
FAN20G1284 Fragaria x ananassa
FAN24G0005 Fragaria x ananassa
FAN26G2374 Fragaria x ananassa
FAN26G2752 Fragaria x ananassa
FAN27G0140 Fragaria x ananassa
FAN28G1021 Fragaria x ananassa
FvH4_1g10501 Fragaria vesca
FvH4_2g16610 Fragaria vesca
Glyma.01G159500 Glycine max
Glyma.02G041700 Glycine max
Glyma.11G084700 Glycine max
Glyma.16G118400 Glycine max
Gohir.A01G174800 Gossypium hirsutum
Gohir.A02G177200 Gossypium hirsutum
Gohir.A03G209500 Gossypium hirsutum
Gohir.A04G125500 Gossypium hirsutum
Gohir.A12G033500 Gossypium hirsutum
Gohir.D01G165900 Gossypium hirsutum
Gohir.D02G231200 Gossypium hirsutum
Gohir.D03G002700 Gossypium hirsutum
Gohir.D04G170400 Gossypium hirsutum
Gohir.D12G039300 Gossypium hirsutum
Gorai.002G206400 Gossypium raimondii
Gorai.003G002900 Gossypium raimondii
Gorai.005G258800 Gossypium raimondii
Gorai.008G041000 Gossypium raimondii
Gorai.012G158800 Gossypium raimondii
GSVIVG01003842001 Vitis vinifera
GSVIVG01003843001 Vitis vinifera
GSVIVG01023890001 Vitis vinifera
GSVIVG01023891001 Vitis vinifera
HanXRQChr09g0258171 Helianthus annuus
HanXRQChr14g0442441 Helianthus annuus
HanXRQChr15g0476471 Helianthus annuus
HanXRQChr17g0544001 Helianthus annuus
HanXRQChr17g0557381 Helianthus annuus
Haze_02017 Corylus avellana
Haze_03670 Corylus avellana
Haze_26288 Corylus avellana
Hma1.2p1_0032F.1_g018830 Hydrangea macrophylla
Hma1.2p1_0271F.1_g108910 Hydrangea macrophylla
Hma1.2p1_2491F.1_g323200 Hydrangea macrophylla
HPP92_002452 Vanilla planifolia
HPP92_022691 Vanilla planifolia
Hund00361 Selenicereus undatus
Hund06166 Selenicereus undatus
Lalb_Chr05g0211891 Lupinus albus
Lalb_Chr09g0321251 Lupinus albus
Lalb_Chr09g0321261 Lupinus albus
Lalb_Chr16g0377241 Lupinus albus
Lj2C496T4 Lonicera japonica
Lj2g0024598 Lotus japonicus
Lj4C234G1 Lonicera japonica
Lj4g0010573 Lotus japonicus
Lj9A406G55 Lonicera japonica
Lsat_1_v5_gn_2_73501 Lactuca sativa
Lsat_1_v5_gn_2_96161 Lactuca sativa
Lsat_1_v5_gn_3_48760 Lactuca sativa
Lsat_1_v5_gn_3_68121 Lactuca sativa
Lsat_1_v5_gn_3_70161 Lactuca sativa
Lsat_1_v5_gn_4_18300 Lactuca sativa
Lsat_1_v5_gn_4_6941 Lactuca sativa
Lsat_1_v5_gn_5_3660 Lactuca sativa
Lsat_1_v5_gn_6_79760 Lactuca sativa
Lsat_1_v5_gn_6_79780 Lactuca sativa
Lsat_1_v5_gn_7_103200 Lactuca sativa
Lsat_1_v5_gn_9_26460 Lactuca sativa
Lsat_1_v5_gn_9_34501 Lactuca sativa
Manes.01G154200 Manihot esculenta
Manes.02G113000 Manihot esculenta
Mapoly0065s0073 Marchantia polymorpha
MBI01_g09376_MAGBIO Magnolia biondii
MBI05_g11197_MAGBIO Magnolia biondii
MBI05_g12023_MAGBIO Magnolia biondii
MBI07_g08568_MAGBIO Magnolia biondii
MBI08_g12716_MAGBIO Magnolia biondii
MBI19_g41063_MAGBIO Magnolia biondii
MBI19_g42299_MAGBIO Magnolia biondii
MCO09G084 Micromonas commoda
MD02G1118800 Malus domestica
MD02G1118900 Malus domestica
MD05G1134300 Malus domestica
MD10G1139400 Malus domestica
MD15G1232900 Malus domestica
Medtr5g023830 Medicago truncatula
Medtr8g072040 Medicago truncatula
Medtr8g073910 Medicago truncatula
Medtr8g073920 Medicago truncatula
MELO3C013259.2 Cucumis melo
MELO3C013728.2 Cucumis melo
Migut.B00013 Erythranthe guttata
Migut.H02196 Erythranthe guttata
Migut.H02197 Erythranthe guttata
Migut.H02200 Erythranthe guttata
Migut.H02201 Erythranthe guttata
Migut.N01352 Erythranthe guttata
MSTRG.19947 Avicennia marina
MSTRG.2741 Avicennia marina
MSTRG.5470 Avicennia marina
Nitab4.5_0000467g0010 Nicotiana tabacum
Nitab4.5_0000495g0160 Nicotiana tabacum
Nitab4.5_0000702g0110 Nicotiana tabacum
Nitab4.5_0001231g0040 Nicotiana tabacum
Nitab4.5_0002850g0080 Nicotiana tabacum
Nitab4.5_0005297g0060 Nicotiana tabacum
Nitab4.5_0006877g0010 Nicotiana tabacum
Nn5g30962 Nelumbo nucifera
Nn6g31721 Nelumbo nucifera
Oeu010279.1 Olea europaea
Oeu021982.1 Olea europaea
Oeu051846.1 Olea europaea
Oeu053044.3 Olea europaea
Oeu062475.1 Olea europaea
Os03g0131300 Oryza sativa ssp. japonica
Os10g0542200 Oryza sativa ssp. japonica
Peaxi162Scf00442g00029 Petunia axillaris
Peaxi162Scf00580g00419 Petunia axillaris
Peaxi162Scf01446g00004 Petunia axillaris
PGR042G0581 Punica granatum
PGR142G3843 Punica granatum
PGSC0003DMG400001571 Solanum tuberosum
PGSC0003DMG400017491 Solanum tuberosum
PGSC0003DMG400018686 Solanum tuberosum
Phvul.002G115300 Phaseolus vulgaris
Phvul.003G269300 Phaseolus vulgaris
Potri.004G205100 Populus trichocarpa
Potri.005G100200 Populus trichocarpa
Potri.009G166000 Populus trichocarpa
Pp3c12_13580 Physcomitrium patens
Pp3c3_32590 Physcomitrium patens
Pp3c4_6720 Physcomitrium patens
Pp3c4_6722 Physcomitrium patens
Pp3c8_4020 Physcomitrium patens
PRCOL_00001915 Prasinoderma coloniale
Prupe.7G181000 Prunus persica
Prupe.8G178100 Prunus persica
Psat0s943g0080 Pisum sativum
Psat2g149480 Pisum sativum
Psat4g104080 Pisum sativum
PSO210G3733 Papaver somniferum
PSO541G2185 Papaver somniferum
PSO675G1621 Papaver somniferum
QL06p052823 Quercus lobata
QL06p053755 Quercus lobata
QL11p055598 Quercus lobata
QL11p055900 Quercus lobata
RcHm_v2.0_Chr2g0097401 Rosa chinensis
RcHm_v2.0_Chr2g0097491 Rosa chinensis
RcHm_v2.0_Chr2g0097501 Rosa chinensis
RcHm_v2.0_Chr6g0280671 Rosa chinensis
Rhsim07G0190800 Rhododendron simsii
Rhsim08G0027900 Rhododendron simsii
Rhsim10G0197500 Rhododendron simsii
Rhsim11G0197000 Rhododendron simsii
Sabra04G0138400 Salix brachista
Sabra05G0082800 Salix brachista
Sabra09G0129800 Salix brachista
Sc08g0002320 Simmondsia chinensis
Sc18g0005990 Simmondsia chinensis
Sed0007443 Sechium edule
Sed0010207 Sechium edule
Sed0025489 Sechium edule
SEGI_13419 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30979 Striga asiatica
SGA_v2.0_scaffold32G13343 Striga asiatica
SGA_v2.0_scaffold58G20316 Striga asiatica
SGA_v2.0_scaffold58G20317 Striga asiatica
SMO116G0192 Selaginella moellendorffii
Solyc02g060570.1 Solanum lycopersicum
Solyc02g060580.3 Solanum lycopersicum
Solyc02g060585.1 Solanum lycopersicum
Solyc02g060590.2 Solanum lycopersicum
Solyc02g060595.1 Solanum lycopersicum
Solyc02g060600.1 Solanum lycopersicum
Solyc02g061610.1 Solanum lycopersicum
Solyc02g061630.1 Solanum lycopersicum
Solyc02g061640.2 Solanum lycopersicum
Solyc02g061665.1 Solanum lycopersicum
Solyc02g061670.1 Solanum lycopersicum
Solyc02g061680.3 Solanum lycopersicum
Solyc02g061710.2 Solanum lycopersicum
Solyc02g061720.3 Solanum lycopersicum
Solyc02g082800.3 Solanum lycopersicum
Solyc03g032160.3 Solanum lycopersicum
Sopen02g012750 Solanum pennellii
Sopen02g027600 Solanum pennellii
Sopen03g006010 Solanum pennellii
Sp3g30510 Schrenkiella parvula
Sp7g33070 Schrenkiella parvula
TAR376G0846 Trochodendron aralioides
TAR381G1450 Trochodendron aralioides
TAR625G1397 Trochodendron aralioides
TAR628G0768 Trochodendron aralioides
THA.LOC104807401 Tarenaya hassleriana
THA.LOC104819722 Tarenaya hassleriana
Thecc.01G006700 Theobroma cacao
Thecc.02G044900 Theobroma cacao
Thhalv10022621m.g Eutrema salsugineum
Thhalv10024813m.g Eutrema salsugineum
TPR.G18299 Trifolium pratense
TPR.G18300 Trifolium pratense
TPR.G25116 Trifolium pratense
TWI09G0167 Tripterygium wilfordii
TWI31G0016 Tripterygium wilfordii
TWI75G1468 Tripterygium wilfordii
TWI79G0496 Tripterygium wilfordii
unitig_0.g2362 Utricularia gibba
unitig_0.g2363 Utricularia gibba
unitig_52.g17364 Utricularia gibba
unitig_52.g17365 Utricularia gibba
unitig_746.g26874 Utricularia gibba
unitig_899.g15613 Utricularia gibba
unitig_899.g15614 Utricularia gibba
vmacro02328 Vaccinium macrocarpon
vmacro18456 Vaccinium macrocarpon
vmacro18457 Vaccinium macrocarpon
vmacro20528 Vaccinium macrocarpon
VMungo0251G2413 Vigna mungo
VMungo1215G1850 Vigna mungo
Zm00001eb002530 Zea mays
Zm00001eb022400 Zea mays
Zm00001eb393840 Zea mays
Zm00001eb402540 Zea mays

User provided reference genes

Program Settings