Gene: Carub.0003s3114

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0003s3114
Transcript Identifier Carub.0003s3114.1
Gene Type Coding gene
Location scaffold_3 : 13223608-13226848 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001927
#Genes/#Species 343/97
Phylogenetic origin

ID ORTHO05D001972
#Genes/#Species 331/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Carub.0003s3114.v1.1
pacid 39242112
synonym Carubv10016132m.g

Descriptions

Short descriptions
Ortholog descriptions

Description K04523 - ubiquilin (UBQLN, DSK2)

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0031593	ISO	PLAZA Integrative Orthology	polyubiquitin modification-dependent protein binding	AT2G17200

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G17200
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G17200

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR015940	Ubiquitin-associated domain
IPR009060	UBA-like superfamily
IPR000626	Ubiquitin-like domain
IPR006636	Heat shock chaperonin-binding
IPR029071	Ubiquitin-like domain superfamily

Mapman id	Description
19.2.4.2.4.3	Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (DSK2)