Gene: AT2G17190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G17190
  • Transcript Identifier AT2G17190.1
  • Gene Type Coding gene
  • Location Chr2 : 7478272-7481361 : negative

Gene Family Information

  • ID HOM05D001927
  • #Genes/#Species 343/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G17190.1
  • Alias DSK2a
  • uniprot Q9SII9

Descriptions

  • Description ubiquitin family protein
  • Computational description ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17200.1); Has 11292 Blast hits to 6186 proteins in 743 species: Archae - 6; Bacteria - 243; Metazoa - 4778; Fungi - 1683; Plants - 2450; Viruses - 166; Other Eukaryotes - 1966 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031593
IDA
IBA
Gene Ontologypolyubiquitin modification-dependent protein binding1 2
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus3
GO:0005829
IDA
IBA
Gene Ontologycytosol1 3
GO:0005739
HDA
Gene Ontologymitochondrion4
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000626 Ubiquitin-like domain
IPR006636 Heat shock chaperonin-binding
IPR029071 Ubiquitin-like domain superfamily
IPR015940 Ubiquitin-associated domain
IPR009060 UBA-like superfamily
Mapman id Description
19.2.4.2.4.3 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (DSK2)