Gene: AL3G50060

General Information

Structural Information

Species Arabidopsis lyrata
Gene Identifier AL3G50060
Transcript Identifier AL3G50060.t1
Gene Type Coding gene
Location scaffold_3 : 21877330-21880373 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001927
#Genes/#Species 343/97
Phylogenetic origin

ID ORTHO05D001972
#Genes/#Species 331/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id AL3G50060.v2.1
synonym 480602
synonym fgenesh2_kg.3__3303__AT2G17200.1
pacid 35942544

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0031593	ISO	PLAZA Integrative Orthology	polyubiquitin modification-dependent protein binding	AT2G17200

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G17200
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G17200

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR029071	Ubiquitin-like domain superfamily
IPR000626	Ubiquitin-like domain
IPR015940	Ubiquitin-associated domain
IPR009060	UBA-like superfamily
IPR006636	Heat shock chaperonin-binding

Mapman id	Description
19.2.4.2.4.3	Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (DSK2)