Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20250 Brassica napus
A04p14190 Brassica napus
A08p12850 Brassica napus
Aa31LG2G13180 Aethionema arabicum
Aa31LG9G15130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5648 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.575 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3537 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.221 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2631 Anthoceros agrestis
Actinidia02198 Actinidia chinensis
Actinidia02199 Actinidia chinensis
Actinidia25913 Actinidia chinensis
Ah.07g199260 Amaranthus hybridus
Ah.07g199270 Amaranthus hybridus
Ah.12g053960 Amaranthus hybridus
AL7G37640 Arabidopsis lyrata
AL7G48280 Arabidopsis lyrata
AL7G48350 Arabidopsis lyrata
Aqoxy7G00853 Aquilegia oxysepala
Aqoxy7G00854 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1W2FB9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4V75MI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5JK48S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CW5K44 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RES91D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XA2ZF2 Arachis hypogaea
AT4G17070 Arabidopsis thaliana
AT5G41150 Arabidopsis thaliana
ATR0107G001 Amborella trichopoda
ATR0665G190 Amborella trichopoda
ATR0665G232 Amborella trichopoda
Atru.chr5.99 Acer truncatum
Atru.chr9.1199 Acer truncatum
Atru.chr9.1200 Acer truncatum
Atru.chr9.1201 Acer truncatum
Atru.chr9.1202 Acer truncatum
Atru.chr9.1203 Acer truncatum
AUR62007171 Chenopodium quinoa
AUR62007172 Chenopodium quinoa
AUR62018832 Chenopodium quinoa
AUR62018833 Chenopodium quinoa
BcaB04g18384 Brassica carinata
BcaB04g18387 Brassica carinata
BcaB06g27602 Brassica carinata
BcaC02g08980 Brassica carinata
BcaC07g38035 Brassica carinata
BcaNung00127 Brassica carinata
BolC1t02490H Brassica oleracea
BolC4t26415H Brassica oleracea
BolC8t48429H Brassica oleracea
BraA04t17079Z Brassica rapa
BraA08t33269Z Brassica rapa
C01p25390 Brassica napus
C04p48230 Brassica napus
CAN.G572.14 Capsicum annuum
CAN.G572.15 Capsicum annuum
CANSAT21G1847 Cannabis sativa
CANSAT21G2194 Cannabis sativa
CANSAT25G0255 Cannabis sativa
CARHR213220 Cardamine hirsuta
CARHR223650 Cardamine hirsuta
Carub.0007s2433 Capsella rubella
Carub.0007s3432 Capsella rubella
Ca_08045_v3 Cicer arietinum L.
Ca_24613_v3 Cicer arietinum L.
Ca_24615_v3 Cicer arietinum L.
CBR_g39228 Chara braunii
CBR_g470 Chara braunii
CBR_g69645 Chara braunii
Cc08_g11220 Coffea canephora
Cc08_g11250 Coffea canephora
CDE02G0676 Ceratophyllum demersum
CDE04G2668 Ceratophyllum demersum
CDE12G0256 Ceratophyllum demersum
Cfa012332 Carpinus fangiana
Cfa026920 Carpinus fangiana
Ciclev10023925m.g Citrus clementina
Ciclev10024418m.g Citrus clementina
CiPaw.11G072100 Carya illinoinensis
CiPaw.12G056000 Carya illinoinensis
CiPaw.14G018400 Carya illinoinensis
ClCG05G003040 Citrullus lanatus
ClCG09G012670 Citrullus lanatus
ClCG10G002160 Citrullus lanatus
COL.COLO4_00166 Corchorus olitorius
COL.COLO4_06683 Corchorus olitorius
COL.COLO4_06684 Corchorus olitorius
COL.COLO4_12375 Corchorus olitorius
Cpa.g.c28699.1 Carica papaya
Cpa.g.sc98.61 Carica papaya
Cpa.g.sc98.64 Carica papaya
Cpa.g.sc98.72 Carica papaya
Cre02.g080850 Chlamydomonas reinhardtii
Cre06.g307800 Chlamydomonas reinhardtii
Cre06.g311400 Chlamydomonas reinhardtii
Cre13.g603950 Chlamydomonas reinhardtii
Cre14.g628450 Chlamydomonas reinhardtii
CsaV3_3G002250 Cucumis sativus L.
CsaV3_3G010660 Cucumis sativus L.
CsaV3_3G049790 Cucumis sativus L.
CSS0023599 Camellia sinensis var. sinensis
CSS0038249 Camellia sinensis var. sinensis
DCAR_000656 Daucus carota
DCAR_029498 Daucus carota
DCAR_029501 Daucus carota
DCAR_029503 Daucus carota
DCAR_032182 Daucus carota
Dinv07465 Davidia involucrata
Dinv25138 Davidia involucrata
Dinv25139 Davidia involucrata
Dinv28880 Davidia involucrata
Dinv39794 Davidia involucrata
Dinv40944 Davidia involucrata
Dinv43603 Davidia involucrata
Duzib084G0537 Durio zibethinus
Duzib138G1052 Durio zibethinus
Duzib205G1274 Durio zibethinus
Duzib205G1673 Durio zibethinus
ECA246G2103 Erigeron canadensis
ECA246G3991 Erigeron canadensis
EL10Ac5g12260 Beta vulgaris
Eucgr.E00348 Eucalyptus grandis
Eucgr.E00349 Eucalyptus grandis
FAN03G2304 Fragaria x ananassa
FAN06G2496 Fragaria x ananassa
FAN08G2877 Fragaria x ananassa
FAN10G4135 Fragaria x ananassa
FAN13G0006 Fragaria x ananassa
FAN13G0539 Fragaria x ananassa
FAN18G1605 Fragaria x ananassa
FAN18G2460 Fragaria x ananassa
FvH4_5g20470 Fragaria vesca
FvH4_5g20480 Fragaria vesca
FvH4_7g09211 Fragaria vesca
Glyma.01G204300 Glycine max
Glyma.01G204467 Glycine max
Glyma.01G204533 Glycine max
Glyma.09G245200 Glycine max
Glyma.11G038500 Glycine max
Glyma.11G038700 Glycine max
Glyma.17G148700 Glycine max
Glyma.18G248100 Glycine max
Gohir.A08G162600 Gossypium hirsutum
Gohir.A08G162700 Gossypium hirsutum
Gohir.A09G197200 Gossypium hirsutum
Gohir.A11G074800 Gossypium hirsutum
Gohir.D08G182600 Gossypium hirsutum
Gohir.D08G182700 Gossypium hirsutum
Gohir.D09G191800 Gossypium hirsutum
Gohir.D11G079500 Gossypium hirsutum
Gorai.004G191600 Gossypium raimondii
Gorai.004G191700 Gossypium raimondii
Gorai.006G214600 Gossypium raimondii
Gorai.007G085200 Gossypium raimondii
GSVIVG01002050001 Vitis vinifera
GSVIVG01002051001 Vitis vinifera
GSVIVG01002647001 Vitis vinifera
GSVIVG01003790001 Vitis vinifera
GSVIVG01004825001 Vitis vinifera
GSVIVG01004826001 Vitis vinifera
GSVIVG01018309001 Vitis vinifera
HanXRQChr01g0015991 Helianthus annuus
HanXRQChr01g0016001 Helianthus annuus
HanXRQChr17g0535581 Helianthus annuus
Haze_08360 Corylus avellana
Hma1.2p1_0840F.1_g226690 Hydrangea macrophylla
Hma1.2p1_3159F.1_g333390 Hydrangea macrophylla
Hma1.2p1_3159F.1_g333400 Hydrangea macrophylla
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla
HPP92_000025 Vanilla planifolia
HPP92_000026 Vanilla planifolia
HPP92_001389 Vanilla planifolia
HPP92_002782 Vanilla planifolia
HPP92_012638 Vanilla planifolia
HPP92_013056 Vanilla planifolia
HPP92_025743 Vanilla planifolia
HPP92_027917 Vanilla planifolia
HPP92_028027 Vanilla planifolia
HPP92_028028 Vanilla planifolia
HPP92_028029 Vanilla planifolia
HPP92_028226 Vanilla planifolia
Hund11502 Selenicereus undatus
Hund14476 Selenicereus undatus
Hund14477 Selenicereus undatus
Lalb_Chr01g0021681 Lupinus albus
Lalb_Chr05g0214201 Lupinus albus
Lalb_Chr09g0324121 Lupinus albus
Lalb_Chr09g0324141 Lupinus albus
Lalb_Chr19g0126401 Lupinus albus
Lalb_Chr19g0126411 Lupinus albus
Lj1g0018104 Lotus japonicus
Lj2g0000600 Lotus japonicus
Lj2g0012346 Lotus japonicus
Lj8A278T25 Lonicera japonica
Lj8C277T15 Lonicera japonica
Lj9A553T47 Lonicera japonica
Lsat_1_v5_gn_3_15381 Lactuca sativa
Lsat_1_v5_gn_3_15401 Lactuca sativa
Manes.01G089700 Manihot esculenta
Manes.01G089800 Manihot esculenta
Manes.01G273400 Manihot esculenta
Mapoly0007s0092 Marchantia polymorpha
Mapoly0022s0130 Marchantia polymorpha
Mapoly0034s0116 Marchantia polymorpha
MBI04_g36289_MAGBIO Magnolia biondii
MBI04_g38561_MAGBIO Magnolia biondii
MBI04_g38562_MAGBIO Magnolia biondii
MCO15G261 Micromonas commoda
MCO16G346 Micromonas commoda
MD04G1054800 Malus domestica
MD06G1046500 Malus domestica
MD06G1046600 Malus domestica
MD07G1096900 Malus domestica
MD07G1097200 Malus domestica
Medtr5g013480 Medicago truncatula
Medtr5g013540 Medicago truncatula
Medtr7g081200 Medicago truncatula
MELO3C003338.2 Cucumis melo
MELO3C006285.2 Cucumis melo
MELO3C013896.2 Cucumis melo
Migut.E01262 Erythranthe guttata
Migut.E01632 Erythranthe guttata
Migut.F01957 Erythranthe guttata
MSTRG.13777 Avicennia marina
MSTRG.27485 Avicennia marina
MSTRG.9151 Avicennia marina
Nitab4.5_0003335g0030 Nicotiana tabacum
Nitab4.5_0003335g0040 Nicotiana tabacum
Nitab4.5_0004227g0020 Nicotiana tabacum
Nitab4.5_0004227g0030 Nicotiana tabacum
Nn1g00743 Nelumbo nucifera
Nn1g00744 Nelumbo nucifera
Nn6g33751 Nelumbo nucifera
Oeu017206.1 Olea europaea
Oeu028057.3 Olea europaea
Oeu040671.1 Olea europaea
Oeu062966.1 Olea europaea
Os03g0100300 Oryza sativa ssp. japonica
Os03g0100400 Oryza sativa ssp. japonica
Peaxi162Scf00301g00615 Petunia axillaris
Peaxi162Scf00301g00621 Petunia axillaris
PGR031G0104 Punica granatum
PGR042G1059 Punica granatum
PGR042G3895 Punica granatum
PGSC0003DMG400026213 Solanum tuberosum
PGSC0003DMG400026214 Solanum tuberosum
Phvul.002G001900 Phaseolus vulgaris
Phvul.002G002100 Phaseolus vulgaris
Phvul.008G049200 Phaseolus vulgaris
Potri.001G150300 Populus trichocarpa
Potri.001G150400 Populus trichocarpa
Potri.002G139600 Populus trichocarpa
Potri.003G083900 Populus trichocarpa
Potri.014G051300 Populus trichocarpa
Pp3c15_10740 Physcomitrium patens
Pp3c15_21470 Physcomitrium patens
Pp3c18_11670 Physcomitrium patens
Pp3c9_3160 Physcomitrium patens
PRCOL_00000830 Prasinoderma coloniale
PRCOL_00002244 Prasinoderma coloniale
PRCOL_00002881 Prasinoderma coloniale
Prupe.2G121100 Prunus persica
Prupe.5G054800 Prunus persica
Prupe.5G054900 Prunus persica
Psat0s3354g0040 Pisum sativum
Psat2g175640 Pisum sativum
Psat2g175720 Pisum sativum
Psat3g099640 Pisum sativum
Psat4g192040 Pisum sativum
Psat5g084960 Pisum sativum
Psat5g140400 Pisum sativum
Psat7g123840 Pisum sativum
PSO063G1476 Papaver somniferum
PSO675G3297 Papaver somniferum
QL04p028582 Quercus lobata
QL04p028706 Quercus lobata
QL12p008613 Quercus lobata
QL12p008620 Quercus lobata
RcHm_v2.0_Chr1g0345271 Rosa chinensis
RcHm_v2.0_Chr4g0410431 Rosa chinensis
RcHm_v2.0_Chr7g0205791 Rosa chinensis
RcHm_v2.0_Chr7g0205801 Rosa chinensis
Rhsim07G0136100 Rhododendron simsii
Rhsim11G0061800 Rhododendron simsii
Rhsim11G0063300 Rhododendron simsii
Sabra01G0120100 Salix brachista
Sabra01G0120200 Salix brachista
Sabra02G0108700 Salix brachista
Sabra14G0036400 Salix brachista
Sabra14G0038500 Salix brachista
SalBow1G0188 Salvia bowleyana
SalBow1G4075 Salvia bowleyana
SalBow4G3207 Salvia bowleyana
Sc01g0007950 Simmondsia chinensis
Sc01g0007960 Simmondsia chinensis
Sed0012793 Sechium edule
Sed0013079 Sechium edule
Sed0019172 Sechium edule
Sed0021992 Sechium edule
Sed0023004 Sechium edule
Sed0025805 Sechium edule
SEGI_01687 Sequoiadendron giganteum
SEGI_02234 Sequoiadendron giganteum
SEGI_05481 Sequoiadendron giganteum
SEGI_20203 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06381 Striga asiatica
SGA_v2.0_scaffold6G03161 Striga asiatica
SHI07797 Sapria himalayana
SHI07802 Sapria himalayana
SMO118G0017 Selaginella moellendorffii
SMO141G0008 Selaginella moellendorffii
Solyc08g077790.3 Solanum lycopersicum
Solyc08g077800.4 Solanum lycopersicum
Sopen08g026300 Solanum pennellii
Sopen08g026310 Solanum pennellii
Sp7g00750 Schrenkiella parvula
Sp7g17110 Schrenkiella parvula
SpUn0010_0230 Schrenkiella parvula
TAR636G0264 Trochodendron aralioides
TAR636G2628 Trochodendron aralioides
THA.LOC104807928 Tarenaya hassleriana
THA.LOC104812738 Tarenaya hassleriana
Thecc.01G400200 Theobroma cacao
Thecc.03G239200 Theobroma cacao
Thecc.03G239300 Theobroma cacao
Thhalv10025645m.g Eutrema salsugineum
Thhalv10027633m.g Eutrema salsugineum
TPR.G1517 Trifolium pratense
TPR.G25980 Trifolium pratense
TPR.G31429 Trifolium pratense
TPR.G31432 Trifolium pratense
TPR.G31434 Trifolium pratense
TWI15G0766 Tripterygium wilfordii
TWI59G0877 Tripterygium wilfordii
TWI81G0509 Tripterygium wilfordii
unitig_46.g18602 Utricularia gibba
unitig_699.g19770 Utricularia gibba
vmacro00746 Vaccinium macrocarpon
vmacro00747 Vaccinium macrocarpon
VMungo1215G0420 Vigna mungo
VMungo1215G1416 Vigna mungo
VMungo1383G1774 Vigna mungo
Zm00001eb208390 Zea mays
Zm00001eb404550 Zea mays

User provided reference genes

Program Settings