Gene: PGR042G1059
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G1059
- Transcript Identifier PGR042G1059.01
- Gene Type Coding gene
- Location NC_045130.1 : 1526068-1531171 : positive
Gene Family Information
- ID HOM05D001887
- #Genes/#Species 349/100
- Phylogenetic origin
- ID ORTHO05D006549
- #Genes/#Species 141/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031394488.1
- name LOC116205928
- name XM_031538628.1
- id gene-LOC116205928
- uniprot A0A6P8DR57
Descriptions
- product DNA repair endonuclease UVH1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT5G41150 |
GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT5G41150 |
GO:0000724 | ISO | PLAZA Integrative Orthology | double-strand break repair via homologous recombination | AT5G41150 |
GO:0009314 | ISO | PLAZA Integrative Orthology | response to radiation | AT5G41150 |
GO:0006289 | ISO | PLAZA Integrative Orthology | nucleotide-excision repair | AT5G41150 |
GO:0000413 | ISO | PLAZA Homology (enrichment) | protein peptidyl-prolyl isomerization | HOM05D001887 |
GO:0000720 | ISO | PLAZA Integrative Orthology | pyrimidine dimer repair by nucleotide-excision repair | AT5G41150 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0004518 | IEA | GOA Database | nuclease activity | |
GO:0004518 | IEA | InterPro | nuclease activity | |
GO:0004519 | IEA | GOA Database | endonuclease activity | |
GO:0003755 | ISO | PLAZA Homology (enrichment) | peptidyl-prolyl cis-trans isomerase activity | HOM05D001887 |
GO:0000014 | ISO | PLAZA Integrative Orthology | single-stranded DNA endodeoxyribonuclease activity | AT5G41150 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
14.6.4.1 | DNA damage response.nucleotide excision repair (NER).XPF-ERCC1 DNA repair endonuclease complex.endonuclease component XPF |