Gene: PGSC0003DMG400026214

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400026214
  • Transcript Identifier PGSC0003DMT400067435
  • Gene Type Coding gene
  • Location ST4.03ch08 : 50950733-50956871 : positive

Gene Family Information

  • ID HOM05D001887
  • #Genes/#Species 349/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37468992
  • id PGSC0003DMG400026214.v4.03
  • uniprot M1CH90

Descriptions

  • Description DNA repair endonuclease UVH1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006296
IBA
GOA Databasenucleotide-excision repair, DNA incision, 5'-to lesion
GO:0000720
ISO
PLAZA Integrative Orthologypyrimidine dimer repair by nucleotide-excision repair AT5G41150
GO:0000413
ISO
PLAZA Homology (enrichment)protein peptidyl-prolyl isomerization HOM05D001887
GO:0006289
ISO
PLAZA Integrative Orthologynucleotide-excision repair AT5G41150
GO:0009314
ISO
PLAZA Integrative Orthologyresponse to radiation AT5G41150
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G41150
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G41150
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0000712
IBA
GOA Databaseresolution of meiotic recombination intermediates
GO:1901255
IBA
GOA Databasenucleotide-excision repair involved in interstrand cross-link repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
ISO
PLAZA Homology (enrichment)peptidyl-prolyl cis-trans isomerase activity HOM05D001887
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000014
IBA
GOA Databasesingle-stranded DNA endodeoxyribonuclease activity
GO:0003684
IBA
GOA Databasedamaged DNA binding
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000110
IBA
GOA Databasenucleotide-excision repair factor 1 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006166 ERCC4 domain
IPR010994 RuvA domain 2-like
IPR011335 Restriction endonuclease type II-like
Mapman id Description
14.6.4.1 DNA damage response.nucleotide excision repair (NER).XPF-ERCC1 DNA repair endonuclease complex.endonuclease component XPF