Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p33210 Brassica napus
A07p17170 Brassica napus
A09p09790 Brassica napus
A10p23920 Brassica napus
Aa31LG11G14700 Aethionema arabicum
Aa31LG1G15320 Aethionema arabicum
Aa31LG8G15600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1868 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2634 Anthoceros agrestis
Actinidia06021 Actinidia chinensis
Actinidia19180 Actinidia chinensis
Actinidia19181 Actinidia chinensis
Actinidia35639 Actinidia chinensis
Actinidia35640 Actinidia chinensis
Actinidia36088 Actinidia chinensis
Actinidia36557 Actinidia chinensis
Ah.02g125220 Amaranthus hybridus
Ah.03g140800 Amaranthus hybridus
Ah.12g062210 Amaranthus hybridus
AL3G51730 Arabidopsis lyrata
AL6G25560 Arabidopsis lyrata
AL8G44700 Arabidopsis lyrata
Aqoxy6G01095 Aquilegia oxysepala
Aqoxy7G01736 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4N0TPQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6XTUR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SUCZ0Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2BCF1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YVWU75 Arachis hypogaea
AT2G18450 Arabidopsis thaliana
AT5G14760 Arabidopsis thaliana
AT5G66760 Arabidopsis thaliana
ATR0730G204 Amborella trichopoda
ATR0733G007 Amborella trichopoda
Atru.chr3.565 Acer truncatum
Atru.chr6.2304 Acer truncatum
AUR62000825 Chenopodium quinoa
AUR62004044 Chenopodium quinoa
AUR62005148 Chenopodium quinoa
AUR62007559 Chenopodium quinoa
AUR62036486 Chenopodium quinoa
AUR62037090 Chenopodium quinoa
AUR62038367 Chenopodium quinoa
BcaB02g09993 Brassica carinata
BcaB04g20103 Brassica carinata
BcaB07g29656 Brassica carinata
BcaB08g34836 Brassica carinata
BcaB08g36949 Brassica carinata
BcaC01g02866 Brassica carinata
BcaC03g18401 Brassica carinata
BcaC04g19011 Brassica carinata
BcaC04g23158 Brassica carinata
BcaC06g34742 Brassica carinata
BcaNung00465 Brassica carinata
BolC2t12541H Brassica oleracea
BolC3t18181H Brassica oleracea
BolC7t43035H Brassica oleracea
BolC9t54047H Brassica oleracea
BolC9t54051H Brassica oleracea
BolC9t59077H Brassica oleracea
BraA06t26252Z Brassica rapa
BraA07t29445Z Brassica rapa
BraA09t36626Z Brassica rapa
BraA10t44456Z Brassica rapa
C02p64800 Brassica napus
C03p59240 Brassica napus
C05p47300 Brassica napus
C07p25030 Brassica napus
C09p11450 Brassica napus
C09p11560 Brassica napus
C09p11590 Brassica napus
C09p62390 Brassica napus
CAN.G1806.2 Capsicum annuum
CAN.G358.99 Capsicum annuum
CANSAT01G3171 Cannabis sativa
CANSAT64G1634 Cannabis sativa
CARHR109040 Cardamine hirsuta
CARHR150190 Cardamine hirsuta
CARHR198550 Cardamine hirsuta
CARHR280940 Cardamine hirsuta
Carub.0003s3259 Capsella rubella
Carub.0006s1293 Capsella rubella
Carub.0008s2775 Capsella rubella
Ca_04193_v3 Cicer arietinum L.
Ca_22263_v3 Cicer arietinum L.
Ca_22277_v3 Cicer arietinum L.
Ca_24842_v3 Cicer arietinum L.
CBR_g31678 Chara braunii
CBR_g41133 Chara braunii
Cc07_g02190 Coffea canephora
Cc07_g09450 Coffea canephora
CDE04G1961 Ceratophyllum demersum
CDE04G3633 Ceratophyllum demersum
CDE05G0064 Ceratophyllum demersum
CDE06G0698 Ceratophyllum demersum
CDE11G0332 Ceratophyllum demersum
Cfa004301 Carpinus fangiana
Cfa007423 Carpinus fangiana
Cfa008568 Carpinus fangiana
Cfa022428 Carpinus fangiana
Cfa024194 Carpinus fangiana
Ciclev10014558m.g Citrus clementina
Ciclev10025149m.g Citrus clementina
CiPaw.01G037100 Carya illinoinensis
CiPaw.02G016800 Carya illinoinensis
CiPaw.03G127300 Carya illinoinensis
CiPaw.04G025100 Carya illinoinensis
ClCG00G006290 Citrullus lanatus
ClCG07G006190 Citrullus lanatus
ClCG07G009150 Citrullus lanatus
ClCG07G009160 Citrullus lanatus
ClCG09G018960 Citrullus lanatus
COL.COLO4_22089 Corchorus olitorius
COL.COLO4_28976 Corchorus olitorius
Cpa.g.sc39.79 Carica papaya
Cpa.g.sc6.105 Carica papaya
Cre12.g528450 Chlamydomonas reinhardtii
Cre14.g619133 Chlamydomonas reinhardtii
CsaV3_4G005080 Cucumis sativus L.
CsaV3_5G027390 Cucumis sativus L.
CSS0005138 Camellia sinensis var. sinensis
CSS0011689 Camellia sinensis var. sinensis
CSS0026761 Camellia sinensis var. sinensis
CSS0040037 Camellia sinensis var. sinensis
CSS0041602 Camellia sinensis var. sinensis
CSS0045670 Camellia sinensis var. sinensis
CSS0046757 Camellia sinensis var. sinensis
CSS0049162 Camellia sinensis var. sinensis
DCAR_001865 Daucus carota
DCAR_017270 Daucus carota
DCAR_021442 Daucus carota
DCAR_021686 Daucus carota
Dinv13541 Davidia involucrata
Dinv33489 Davidia involucrata
Dinv35068 Davidia involucrata
Dinv39978 Davidia involucrata
Duzib147G0476 Durio zibethinus
Duzib147G1267 Durio zibethinus
Duzib187G1849 Durio zibethinus
Duzib264G0324 Durio zibethinus
Duzib264G1210 Durio zibethinus
ECA232G2500 Erigeron canadensis
ECA246G1151 Erigeron canadensis
EL10Ac1g01826 Beta vulgaris
EL10Ac6g15572 Beta vulgaris
EL10Ac7g17283 Beta vulgaris
EL10Ac9g22931 Beta vulgaris
EL10As13g24053 Beta vulgaris
Eucgr.I01794 Eucalyptus grandis
Eucgr.I02452 Eucalyptus grandis
FAN02G0205 Fragaria x ananassa
FAN05G4092 Fragaria x ananassa
FAN09G1732 Fragaria x ananassa
FAN14G0059 Fragaria x ananassa
FAN19G0995 Fragaria x ananassa
FAN23G1783 Fragaria x ananassa
FAN26G1716 Fragaria x ananassa
FAN26G2941 Fragaria x ananassa
FAN28G0311 Fragaria x ananassa
FvH4_1g13410 Fragaria vesca
FvH4_6g50750 Fragaria vesca
Glyma.01G100600 Glycine max
Glyma.01G175600 Glycine max
Glyma.02G057400 Glycine max
Glyma.05G007600 Glycine max
Glyma.11G067800 Glycine max
Gohir.A02G164800 Gossypium hirsutum
Gohir.A07G220600 Gossypium hirsutum
Gohir.A12G064900 Gossypium hirsutum
Gohir.D03G015200 Gossypium hirsutum
Gohir.D07G227300 Gossypium hirsutum
Gohir.D12G065000 Gossypium hirsutum
Gorai.001G262200 Gossypium raimondii
Gorai.003G015500 Gossypium raimondii
Gorai.008G068200 Gossypium raimondii
GSVIVG01018976001 Vitis vinifera
GSVIVG01021924001 Vitis vinifera
GSVIVG01032470001 Vitis vinifera
HanXRQChr02g0037401 Helianthus annuus
HanXRQChr09g0261451 Helianthus annuus
HanXRQChr15g0465291 Helianthus annuus
HanXRQChr16g0515951 Helianthus annuus
HanXRQChr16g0530311 Helianthus annuus
Haze_14674 Corylus avellana
Haze_14676 Corylus avellana
Haze_15100 Corylus avellana
Haze_26259 Corylus avellana
Hma1.2p1_0400F.1_g144450 Hydrangea macrophylla
Hma1.2p1_0717F.1_g208120 Hydrangea macrophylla
Hma1.2p1_0993F.1_g245500 Hydrangea macrophylla
Hma1.2p1_3249F.1_g334420 Hydrangea macrophylla
HPP92_003798 Vanilla planifolia
HPP92_017680 Vanilla planifolia
HPP92_017748 Vanilla planifolia
Hund02266 Selenicereus undatus
Hund16428 Selenicereus undatus
Hund28964 Selenicereus undatus
Hund28966 Selenicereus undatus
Lalb_Chr05g0212821 Lupinus albus
Lalb_Chr05g0212831 Lupinus albus
Lalb_Chr05g0212841 Lupinus albus
Lalb_Chr06g0176021 Lupinus albus
Lalb_Chr09g0322451 Lupinus albus
Lalb_Chr16g0377871 Lupinus albus
Lj2g0026373 Lotus japonicus
Lj4C200G5 Lonicera japonica
Lj4g0012722 Lotus japonicus
Lj4g0016367 Lotus japonicus
Lj7C592T2 Lonicera japonica
Lsat_1_v5_gn_3_70920 Lactuca sativa
Lsat_1_v5_gn_4_150721 Lactuca sativa
Manes.01G134800 Manihot esculenta
Manes.02G093200 Manihot esculenta
Manes.17G120500 Manihot esculenta
Mapoly0002s0067 Marchantia polymorpha
Mapoly0074s0055 Marchantia polymorpha
MBI02_g14164_MAGBIO Magnolia biondii
MBI10_g09175_MAGBIO Magnolia biondii
MBI11_g21816_MAGBIO Magnolia biondii
MBI16_g14393_MAGBIO Magnolia biondii
MBI16_g34331_MAGBIO Magnolia biondii
MCO06G058 Micromonas commoda
MCO12G459 Micromonas commoda
MCO16G154 Micromonas commoda
MD02G1148900 Malus domestica
MD09G1032700 Malus domestica
MD15G1263800 Malus domestica
MD17G1034300 Malus domestica
Medtr5g020050 Medicago truncatula
Medtr6g007070 Medicago truncatula
MELO3C017560.2 Cucumis melo
MELO3C021545.2 Cucumis melo
Migut.H00116 Erythranthe guttata
Migut.L00516 Erythranthe guttata
Migut.L00517 Erythranthe guttata
MSTRG.3299 Avicennia marina
Nitab4.5_0000434g0160 Nicotiana tabacum
Nitab4.5_0002338g0020 Nicotiana tabacum
Nitab4.5_0002338g0040 Nicotiana tabacum
Nitab4.5_0002338g0060 Nicotiana tabacum
Nitab4.5_0003835g0030 Nicotiana tabacum
Nitab4.5_0003989g0020 Nicotiana tabacum
Nitab4.5_0005830g0010 Nicotiana tabacum
Nn1g05014 Nelumbo nucifera
Nn4g22777 Nelumbo nucifera
Nn5g29584 Nelumbo nucifera
Oeu020073.1 Olea europaea
Oeu042258.3 Olea europaea
Oeu043059.1 Olea europaea
Oeu056742.1 Olea europaea
Oeu056748.1 Olea europaea
Oeu056760.1 Olea europaea
Oeu062921.1 Olea europaea
Os02g0134400 Oryza sativa ssp. japonica
Os07g0134800 Oryza sativa ssp. japonica
Peaxi162Scf00504g00091 Petunia axillaris
Peaxi162Scf00515g00518 Petunia axillaris
PGR031G3995 Punica granatum
PGR119G0879 Punica granatum
PGR142G3307 Punica granatum
PGSC0003DMG400012848 Solanum tuberosum
PGSC0003DMG400014901 Solanum tuberosum
Phvul.002G029800 Phaseolus vulgaris
Phvul.003G253200 Phaseolus vulgaris
Phvul.004G013800 Phaseolus vulgaris
Phvul.007G051600 Phaseolus vulgaris
Potri.001G348600 Populus trichocarpa
Potri.005G123900 Populus trichocarpa
Potri.007G026400 Populus trichocarpa
Pp3c27_4920 Physcomitrium patens
Pp3c3_11960 Physcomitrium patens
Pp3c6_24710 Physcomitrium patens
Pp3c9_15130 Physcomitrium patens
PRCOL_00001144 Prasinoderma coloniale
PRCOL_00002767 Prasinoderma coloniale
PRCOL_00005432 Prasinoderma coloniale
Prupe.3G285300 Prunus persica
Prupe.7G153600 Prunus persica
Psat1g057200 Pisum sativum
Psat2g160000 Pisum sativum
Psat4g092360 Pisum sativum
PSO063G6846 Papaver somniferum
PSO541G3878 Papaver somniferum
PSO541G4495 Papaver somniferum
PSO675G3341 Papaver somniferum
PSO675G6080 Papaver somniferum
PSO832G0053 Papaver somniferum
QL02p076387 Quercus lobata
QL06p045882 Quercus lobata
RcHm_v2.0_Chr2g0101771 Rosa chinensis
RcHm_v2.0_Chr2g0171691 Rosa chinensis
Rhsim08G0115300 Rhododendron simsii
Rhsim10G0021600 Rhododendron simsii
Sabra05G0101500 Salix brachista
Sabra07G0023200 Salix brachista
Sabra16G0228200 Salix brachista
SalBow1G4162 Salvia bowleyana
SalBow5G5094 Salvia bowleyana
Sc03g0002930 Simmondsia chinensis
Sc16g0003620 Simmondsia chinensis
Sc16g0003630 Simmondsia chinensis
Sc16g0003640 Simmondsia chinensis
Sc16g0003680 Simmondsia chinensis
Sed0001215 Sechium edule
Sed0002777 Sechium edule
SEGI_03017 Sequoiadendron giganteum
SEGI_17535 Sequoiadendron giganteum
SEGI_23998 Sequoiadendron giganteum
SEGI_30695 Sequoiadendron giganteum
SEGI_34747 Sequoiadendron giganteum
SEGI_36122 Sequoiadendron giganteum
SEGI_39126 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34872 Striga asiatica
SGA_v2.0_scaffold3G01839 Striga asiatica
SHI03735 Sapria himalayana
SMO116G0376 Selaginella moellendorffii
SMO347G0446 Selaginella moellendorffii
Solyc01g056580.4 Solanum lycopersicum
Solyc02g085350.4 Solanum lycopersicum
Solyc06g008420.2 Solanum lycopersicum
Solyc12g014530.3 Solanum lycopersicum
Sopen02g030040 Solanum pennellii
Sopen12g007400 Solanum pennellii
Sp2g29920 Schrenkiella parvula
Sp3g31870 Schrenkiella parvula
Sp6g29280 Schrenkiella parvula
TAR371G0305 Trochodendron aralioides
TAR376G0804 Trochodendron aralioides
TAR381G1199 Trochodendron aralioides
TAR629G2894 Trochodendron aralioides
THA.LOC104819221 Tarenaya hassleriana
THA.LOC104821074 Tarenaya hassleriana
THA.LOC104821278 Tarenaya hassleriana
Thecc.01G036800 Theobroma cacao
Thecc.04G009900 Theobroma cacao
Thhalv10003821m.g Eutrema salsugineum
Thhalv10015655m.g Eutrema salsugineum
Thhalv10022591m.g Eutrema salsugineum
TPR.G22290 Trifolium pratense
TPR.G2266 Trifolium pratense
TPR.G34987 Trifolium pratense
TWI09G0850 Tripterygium wilfordii
TWI12G0896 Tripterygium wilfordii
TWI56G0328 Tripterygium wilfordii
unitig_62.g23152 Utricularia gibba
unitig_748.g8759 Utricularia gibba
vmacro05829 Vaccinium macrocarpon
vmacro17842 Vaccinium macrocarpon
VMungo0251G2041 Vigna mungo
VMungo0464G0038 Vigna mungo
VMungo1215G0549 Vigna mungo
Zm00001eb017710 Zea mays
Zm00001eb017720 Zea mays
Zm00001eb018220 Zea mays
Zm00001eb063820 Zea mays
Zm00001eb117970 Zea mays
Zm00001eb229330 Zea mays
Zm00001eb231540 Zea mays
Zm00001eb290870 Zea mays
Zm00001eb299550 Zea mays
Zm00001eb306180 Zea mays
Zm00001eb337870 Zea mays
Zm00001eb422230 Zea mays
Zm00001eb442300 Zea mays

User provided reference genes

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