Gene: AT5G66760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G66760
  • Transcript Identifier AT5G66760.1
  • Gene Type Coding gene
  • Location Chr5 : 26653776-26657224 : positive

Gene Family Information

  • ID HOM05D001794
  • #Genes/#Species 364/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G66760.1
  • symbol SDH1-1
  • uniprot O82663

Descriptions

  • Description succinate dehydrogenase 1-1
  • Computational description succinate dehydrogenase 1-1 (SDH1-1); FUNCTIONS IN: cobalt ion binding, succinate dehydrogenase activity, ATP binding; INVOLVED IN: mitochondrial electron transport, succinate to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-2 (TAIR:AT2G18450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006121
IBA
TAS
Gene Ontologymitochondrial electron transport, succinate to ubiquinone1 2
GO:0022900
IEA
GOA Databaseelectron transport chain
GO:0022900
IEA
InterProelectron transport chain
GO:0006099
IEA
Gene Ontologytricarboxylic acid cycle
GO:0006099
IEA
InterProtricarboxylic acid cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000104
IBA
TAS
Gene Ontologysuccinate dehydrogenase activity1 2
GO:0050897
IDA
GOA Databasecobalt ion binding
GO:0050897
HDA
Gene Ontologycobalt ion binding3
GO:0005524
IDA
GOA DatabaseATP binding
GO:0005524
HDA
Gene OntologyATP binding4
GO:0008177
IEA
GOA Databasesuccinate dehydrogenase (ubiquinone) activity
GO:0008177
IBA
Gene Ontologysuccinate dehydrogenase (ubiquinone) activity2
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0050660
IEA
GOA Databaseflavin adenine dinucleotide binding
GO:0050660
IBA
Gene Ontologyflavin adenine dinucleotide binding2
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0016627
IEA
GOA Databaseoxidoreductase activity, acting on the CH-CH group of donors
GO:0016627
IEA
InterProoxidoreductase activity, acting on the CH-CH group of donors
GO:0009055
IBA
Gene Ontologyelectron transfer activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005743
IEA
GOA Databasemitochondrial inner membrane
GO:0005618
IDA
GOA Databasecell wall
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
ISM
Gene Ontologymitochondrion1 5
GO:0005749
IDA
ISS, IBA
Gene Ontologymitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1 2 6
GO:0009505
HDA
Gene Ontologyplant-type cell wall7
GO:0045273
IDA
Gene Ontologyrespiratory chain complex II8
GO:0005794
RCA
Gene OntologyGolgi apparatus9
GO:0009536
HDA
Gene Ontologyplastid10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030664 FAD-dependent oxidoreductase SdhA/FrdA/AprA
IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal
IPR011281 Succinate dehydrogenase, flavoprotein subunit
IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily
IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain
Mapman id Description
2.3.6.1.1 Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.components.flavoprotein component SDH1