Gene: COL.COLO4_22089
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_22089
- Transcript Identifier COL.rna20838
- Gene Type Coding gene
- Location AWUE01017847.1 : 102153-106477 : negative
Gene Family Information
- ID HOM05D001794
- #Genes/#Species 364/100
- Phylogenetic origin
- ID ORTHO05D004177
- #Genes/#Species 188/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna20838
- GenBank OMO84423.1
- id gene22061
- gene_name COLO4_22089
- uniprot A0A1R3IPD1
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006121 | ISO | PLAZA Integrative Orthology | mitochondrial electron transport, succinate to ubiquinone | AT5G66760 |
| GO:0022900 | IEA | GOA Database | electron transport chain | |
| GO:0022900 | IEA | InterPro | electron transport chain |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050660 | IEA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | AT5G66760 |
| GO:0000104 | ISO | PLAZA Integrative Orthology | succinate dehydrogenase activity | AT5G66760 |
| GO:0005524 | ISO | PLAZA Integrative Orthology | ATP binding | AT5G66760 |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0016627 | IEA | GOA Database | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G66760 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G66760 |
| GO:0005749 | ISO | PLAZA Integrative Orthology | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | AT5G66760 |
| GO:0045273 | ISO | PLAZA Integrative Orthology | respiratory chain complex II | AT5G66760 |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR037099 | Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily |
| IPR030664 | FAD-dependent oxidoreductase SdhA/FrdA/AprA |
| IPR003953 | FAD-dependent oxidoreductase 2, FAD binding domain |
| IPR014006 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
| IPR015939 | Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal |
| IPR027477 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily |
| Mapman id | Description |
|---|---|
| 2.3.6.1.1 | Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.components.flavoprotein component SDH1 |