Gene: Solyc02g085350.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g085350.4
- Transcript Identifier Solyc02g085350.4.1
- Gene Type Coding gene
- Location SL4.0ch02 : 46283255-46290211 : negative
Gene Family Information
- ID HOM05D001794
- #Genes/#Species 364/100
- Phylogenetic origin
- ID ORTHO05D004177
- #Genes/#Species 188/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc02g085350.4.1
- uniprot A0A3Q7F7G5
- gene_id Solyc02g085350
Descriptions
- Description Succinate dehydrogenase flavoprotein subunit, mitochondrial (AHRD V3.3 *** A0A2G3D7Q7_CAPCH)
- Note Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (AHRD V3.3 *** A0A2G3D7Q7_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022900 | IEA | GOA Database | electron transport chain | |
| GO:0022900 | IEA | InterPro | electron transport chain | |
| GO:0006121 | IBA | GOA Database | mitochondrial electron transport, succinate to ubiquinone | |
| GO:0006099 | IEA | GOA Database | tricarboxylic acid cycle | |
| GO:0006099 | IEA | InterPro | tricarboxylic acid cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | AT5G66760 |
| GO:0005524 | ISO | PLAZA Integrative Orthology | ATP binding | AT5G66760 |
| GO:0008177 | IBA IEA | GOA Database | succinate dehydrogenase (ubiquinone) activity | |
| GO:0000104 | IBA | GOA Database | succinate dehydrogenase activity | |
| GO:0009055 | IBA | GOA Database | electron transfer activity | |
| GO:0050660 | IBA IEA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0016627 | IEA | GOA Database | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G66760 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G66760 |
| GO:0045273 | ISO | PLAZA Integrative Orthology | respiratory chain complex II | AT5G66760 |
| GO:0005749 | IBA | GOA Database | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005743 | IEA | GOA Database | mitochondrial inner membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027477 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily |
| IPR037099 | Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily |
| IPR030664 | FAD-dependent oxidoreductase SdhA/FrdA/AprA |
| IPR003953 | FAD-dependent oxidoreductase 2, FAD binding domain |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR014006 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
| IPR015939 | Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal |
| IPR011281 | Succinate dehydrogenase, flavoprotein subunit |
| Mapman id | Description |
|---|---|
| 2.3.6.1.1 | Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.components.flavoprotein component SDH1 |