Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24240 Brassica napus
A02p25040 Brassica napus
A02p41180 Brassica napus
A02p41190 Brassica napus
A03p46470 Brassica napus
A03p46490 Brassica napus
A03p46500 Brassica napus
A03p46510 Brassica napus
A03p50250 Brassica napus
A04p26730 Brassica napus
A06p14540 Brassica napus
A09p59930 Brassica napus
Aa31LG11G2480 Aethionema arabicum
Aa31LG11G2510 Aethionema arabicum
Aa31LG11G2520 Aethionema arabicum
Aa31LG4G4350 Aethionema arabicum
Aa31LG7G3190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3965 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5482 Anthoceros agrestis
Actinidia23367 Actinidia chinensis
Actinidia33015 Actinidia chinensis
Actinidia35902 Actinidia chinensis
Ah.13g073370 Amaranthus hybridus
Ah.13g073380 Amaranthus hybridus
AL1G30940 Arabidopsis lyrata
AL2G33895 Arabidopsis lyrata
AL6G34140 Arabidopsis lyrata
AL6G34150 Arabidopsis lyrata
AL6G34170 Arabidopsis lyrata
Aqoxy2G00178 Aquilegia oxysepala
Aqoxy4G01053 Aquilegia oxysepala
Aqoxy4G01057 Aquilegia oxysepala
Aqoxy7G00120 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14SFHV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.200T5X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3BSCY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9TRT4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R43499 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S3LEX3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SVFK59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5GDAR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W53L34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y12SSB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y8K7VT Arachis hypogaea
AT1G18500 Arabidopsis thaliana
AT1G74040 Arabidopsis thaliana
AT5G23010 Arabidopsis thaliana
AT5G23020 Arabidopsis thaliana
ATR0743G008 Amborella trichopoda
Atru.chr3.1618 Acer truncatum
Atru.chr3.369 Acer truncatum
Atru.chr3.370 Acer truncatum
Atru.chr8.1337 Acer truncatum
AUR62002418 Chenopodium quinoa
AUR62021708 Chenopodium quinoa
AUR62023770 Chenopodium quinoa
AUR62023771 Chenopodium quinoa
BcaB01g02720 Brassica carinata
BcaB05g23670 Brassica carinata
BcaB05g23671 Brassica carinata
BcaB07g29870 Brassica carinata
BcaB07g29871 Brassica carinata
BcaB07g31860 Brassica carinata
BcaC02g07734 Brassica carinata
BcaC02g07735 Brassica carinata
BcaC03g16050 Brassica carinata
BcaC03g16051 Brassica carinata
BcaC03g16188 Brassica carinata
BcaC03g18041 Brassica carinata
BcaC03g18042 Brassica carinata
BcaC05g25747 Brassica carinata
BcaC06g33194 Brassica carinata
BcaC06g33195 Brassica carinata
BcaC07g41325 Brassica carinata
BcaC09g49680 Brassica carinata
BcaC09g49681 Brassica carinata
BcaNung02621 Brassica carinata
BcaNung02622 Brassica carinata
BcaNung02623 Brassica carinata
BcaNung05762 Brassica carinata
BcaNung05763 Brassica carinata
BcaNung05764 Brassica carinata
BcaNung06938 Brassica carinata
BolC1t03271H Brassica oleracea
BolC1t03369H Brassica oleracea
BolC1t03370H Brassica oleracea
BolC2t09830H Brassica oleracea
BolC2t09982H Brassica oleracea
BolC2t12154H Brassica oleracea
BolC2t12156H Brassica oleracea
BolC4t27895H Brassica oleracea
BolC5t30378H Brassica oleracea
BolC7t44977H Brassica oleracea
BolC7t44978H Brassica oleracea
BolC8t51875H Brassica oleracea
BolC8t51885H Brassica oleracea
BraA02t07413Z Brassica rapa
BraA02t07492Z Brassica rapa
BraA02t09063Z Brassica rapa
BraA03t13773Z Brassica rapa
BraA03t13775Z Brassica rapa
BraA06t24580Z Brassica rapa
BraA09t41364Z Brassica rapa
C01p34000 Brassica napus
C01p34010 Brassica napus
C01p34020 Brassica napus
C02p38150 Brassica napus
C02p39660 Brassica napus
C02p61060 Brassica napus
C02p61070 Brassica napus
C02p61080 Brassica napus
C05p16770 Brassica napus
C07p44540 Brassica napus
C07p44550 Brassica napus
C07p44560 Brassica napus
C07p44570 Brassica napus
C08p43210 Brassica napus
C08p43360 Brassica napus
CAN.G136.14 Capsicum annuum
CAN.G653.6 Capsicum annuum
CAN.G759.8 Capsicum annuum
CANSAT78G0602 Cannabis sativa
CARHR019120 Cardamine hirsuta
CARHR067180 Cardamine hirsuta
CARHR190510 Cardamine hirsuta
CARHR190520 Cardamine hirsuta
Carub.0001s1813 Capsella rubella
Carub.0002s2083 Capsella rubella
Carub.0002s2517 Capsella rubella
Carub.0006s2078 Capsella rubella
Carub.0006s2079 Capsella rubella
Carub.0006s2080 Capsella rubella
Ca_11395_v3 Cicer arietinum L.
CBR_g23345 Chara braunii
Cc04_g12930 Coffea canephora
CDE08G0437 Ceratophyllum demersum
Cfa015782 Carpinus fangiana
Cfa022310 Carpinus fangiana
Ciclev10020218m.g Citrus clementina
CiPaw.01G103600 Carya illinoinensis
CiPaw.01G103800 Carya illinoinensis
ClCG05G010890 Citrullus lanatus
ClCG10G015360 Citrullus lanatus
COL.COLO4_24385 Corchorus olitorius
Cpa.g.sc71.35 Carica papaya
Cre06.g258733 Chlamydomonas reinhardtii
CsaV3_3G021690 Cucumis sativus L.
CSS0041272 Camellia sinensis var. sinensis
CSS0045396 Camellia sinensis var. sinensis
DCAR_023912 Daucus carota
Dinv05094 Davidia involucrata
Dinv33189 Davidia involucrata
Dinv44173 Davidia involucrata
Duzib151G0160 Durio zibethinus
Duzib212G0950 Durio zibethinus
Duzib268G1036 Durio zibethinus
ECA248G0333 Erigeron canadensis
ECA248G0840 Erigeron canadensis
ECA248G1332 Erigeron canadensis
EL10Ac3g06112 Beta vulgaris
EL10Ac3g06113 Beta vulgaris
Eucgr.A00014 Eucalyptus grandis
Eucgr.A00052 Eucalyptus grandis
Eucgr.A00246 Eucalyptus grandis
Eucgr.A00248 Eucalyptus grandis
Eucgr.A00249 Eucalyptus grandis
Eucgr.L01927 Eucalyptus grandis
FAN19G3177 Fragaria x ananassa
FAN26G1767 Fragaria x ananassa
FAN28G1553 Fragaria x ananassa
FvH4_1g22410 Fragaria vesca
FvH4_1g22460 Fragaria vesca
FvH4_1g22570 Fragaria vesca
Glyma.03G005700 Glycine max
Glyma.10G295400 Glycine max
Glyma.11G169473 Glycine max
Glyma.11G169682 Glycine max
Glyma.11G169891 Glycine max
Glyma.13G024600 Glycine max
Glyma.13G024700 Glycine max
Glyma.13G024900 Glycine max
Glyma.17G159702 Glycine max
Glyma.17G159752 Glycine max
Glyma.19G120400 Glycine max
Glyma.19G120500 Glycine max
Glyma.19G120600 Glycine max
Glyma.20G245300 Glycine max
Gohir.A03G096100 Gossypium hirsutum
Gohir.A10G134600 Gossypium hirsutum
Gohir.D02G112700 Gossypium hirsutum
Gohir.D10G131900 Gossypium hirsutum
Gorai.005G127500 Gossypium raimondii
Gorai.011G145600 Gossypium raimondii
GSVIVG01013566001 Vitis vinifera
HanXRQChr02g0055051 Helianthus annuus
HanXRQChr11g0345431 Helianthus annuus
HanXRQChr11g0345441 Helianthus annuus
HanXRQChr14g0426921 Helianthus annuus
HanXRQChr14g0426931 Helianthus annuus
HanXRQChr14g0426981 Helianthus annuus
HanXRQChr14g0454131 Helianthus annuus
HanXRQChr17g0556861 Helianthus annuus
Haze_00712 Corylus avellana
Haze_18386 Corylus avellana
Hma1.2p1_0554F.1_g177840 Hydrangea macrophylla
Hma1.2p1_0554F.1_g177850 Hydrangea macrophylla
Hma1.2p1_0554F.1_g177870 Hydrangea macrophylla
HPP92_008941 Vanilla planifolia
HPP92_008942 Vanilla planifolia
HPP92_008943 Vanilla planifolia
HPP92_008944 Vanilla planifolia
HPP92_011278 Vanilla planifolia
HPP92_011299 Vanilla planifolia
HPP92_019413 Vanilla planifolia
Hund12357 Selenicereus undatus
Hund22533 Selenicereus undatus
Lalb_Chr06g0164461 Lupinus albus
Lalb_Chr07g0191351 Lupinus albus
Lalb_Chr07g0191361 Lupinus albus
Lalb_Chr07g0191371 Lupinus albus
Lalb_Chr07g0191381 Lupinus albus
Lalb_Chr24g0403541 Lupinus albus
Lalb_Chr24g0403551 Lupinus albus
Lj1g0001497 Lotus japonicus
Lj1g0008321 Lotus japonicus
Lj1g0015040 Lotus japonicus
Lj2A575T46 Lonicera japonica
Lj2A575T47 Lonicera japonica
Lj2C583G0 Lonicera japonica
Lj2C583T13 Lonicera japonica
Lj3A270T45 Lonicera japonica
Lj3A276T35 Lonicera japonica
Lj5g0027743 Lotus japonicus
Lj6A63G27 Lonicera japonica
Lj6C68T6 Lonicera japonica
Lsat_1_v5_gn_1_71501 Lactuca sativa
Lsat_1_v5_gn_1_71541 Lactuca sativa
Manes.04G049401 Manihot esculenta
Manes.11G115800 Manihot esculenta
Mapoly0002s0332 Marchantia polymorpha
MCO04G119 Micromonas commoda
MCO04G271 Micromonas commoda
MD01G1019700 Malus domestica
MD05G1155100 Malus domestica
MD15G1332600 Malus domestica
Medtr1g116500 Medicago truncatula
Medtr7g033125 Medicago truncatula
MELO3C020296.2 Cucumis melo
Migut.G01068 Erythranthe guttata
MSTRG.21991 Avicennia marina
Nitab4.5_0000013g0570 Nicotiana tabacum
Nitab4.5_0000122g0020 Nicotiana tabacum
Nitab4.5_0001411g0050 Nicotiana tabacum
Nitab4.5_0001433g0090 Nicotiana tabacum
Nitab4.5_0001586g0080 Nicotiana tabacum
Nitab4.5_0002544g0050 Nicotiana tabacum
Nitab4.5_0013964g0010 Nicotiana tabacum
Nn4g25034 Nelumbo nucifera
Oeu034282.1 Olea europaea
Oeu053854.1 Olea europaea
Os11g0142500 Oryza sativa ssp. japonica
Os12g0138900 Oryza sativa ssp. japonica
Os12g0589898 Oryza sativa ssp. japonica
Peaxi162Scf00075g01331 Petunia axillaris
Peaxi162Scf00075g01420 Petunia axillaris
Peaxi162Scf00075g01421 Petunia axillaris
Peaxi162Scf00180g00127 Petunia axillaris
PGR004G1113 Punica granatum
PGR142G2160 Punica granatum
PGSC0003DMG400006730 Solanum tuberosum
PGSC0003DMG400014622 Solanum tuberosum
PGSC0003DMG400016337 Solanum tuberosum
PGSC0003DMG400023230 Solanum tuberosum
Phvul.001G091600 Phaseolus vulgaris
Phvul.001G103500 Phaseolus vulgaris
Phvul.001G103833 Phaseolus vulgaris
Phvul.001G104033 Phaseolus vulgaris
Phvul.001G108400 Phaseolus vulgaris
Phvul.001G109780 Phaseolus vulgaris
Phvul.007G004600 Phaseolus vulgaris
Phvul.008G140900 Phaseolus vulgaris
Potri.005G083100 Populus trichocarpa
Pp3c12_15250 Physcomitrium patens
Pp3c12_15380 Physcomitrium patens
Pp3c3_21830 Physcomitrium patens
Pp3c4_4420 Physcomitrium patens
Pp3s58_210 Physcomitrium patens
PRCOL_00001161 Prasinoderma coloniale
Prupe.6G172500 Prunus persica
Psat0s1448g0080 Pisum sativum
Psat0s1448g0160 Pisum sativum
Psat3g064080 Pisum sativum
Psat3g171520 Pisum sativum
Psat6g241040 Pisum sativum
PSO017G0743 Papaver somniferum
PSO675G0030 Papaver somniferum
QL10p045285 Quercus lobata
QL10p045299 Quercus lobata
QL10p045363 Quercus lobata
RcHm_v2.0_Chr2g0116551 Rosa chinensis
RcHm_v2.0_Chr2g0116561 Rosa chinensis
Rhsim04G0176700 Rhododendron simsii
Rhsim04G0176800 Rhododendron simsii
Rhsim09G0032100 Rhododendron simsii
Sabra05G0068200 Salix brachista
SalBow3G0730 Salvia bowleyana
SalBow6G2448 Salvia bowleyana
Sc13g0007350 Simmondsia chinensis
Sed0001526 Sechium edule
Sed0023965 Sechium edule
SEGI_15569 Sequoiadendron giganteum
SEGI_37051 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06157 Striga asiatica
SGA_v2.0_scaffold17G08087 Striga asiatica
SHI06498 Sapria himalayana
SHI06500 Sapria himalayana
SMO134G0267 Selaginella moellendorffii
SMO147G0010 Selaginella moellendorffii
SMO147G0372 Selaginella moellendorffii
SMO200G0184 Selaginella moellendorffii
Solyc06g053400.3 Solanum lycopersicum
Solyc08g014130.3 Solanum lycopersicum
Solyc08g014230.4 Solanum lycopersicum
Solyc08g014240.4 Solanum lycopersicum
Sopen06g018460 Solanum pennellii
Sopen06g018500 Solanum pennellii
Sopen08g005060 Solanum pennellii
Sopen08g005140 Solanum pennellii
Sopen08g005150 Solanum pennellii
Sopen10g006110 Solanum pennellii
Sp1g16450 Schrenkiella parvula
Sp2g24100 Schrenkiella parvula
Sp2g24110 Schrenkiella parvula
Sp5g29260 Schrenkiella parvula
Sp6g02930 Schrenkiella parvula
TAR362G0863 Trochodendron aralioides
TAR628G0485 Trochodendron aralioides
THA.LOC104813896 Tarenaya hassleriana
THA.LOC104818358 Tarenaya hassleriana
THA.LOC104818365 Tarenaya hassleriana
THA.LOC104818520 Tarenaya hassleriana
Thecc.04G184000 Theobroma cacao
Thhalv10003976m.g Eutrema salsugineum
Thhalv10004072m.g Eutrema salsugineum
Thhalv10005522m.g Eutrema salsugineum
Thhalv10007073m.g Eutrema salsugineum
Thhalv10018267m.g Eutrema salsugineum
TPR.G10415 Trifolium pratense
TPR.G1107 Trifolium pratense
TWI31G0216 Tripterygium wilfordii
TWI79G1439 Tripterygium wilfordii
unitig_52.g17676 Utricularia gibba
unitig_52.g17677 Utricularia gibba
vmacro08538 Vaccinium macrocarpon
VMungo0720G2015 Vigna mungo
VMungo1383G0945 Vigna mungo
VMungo1383G1729 Vigna mungo
VMungo1383G3125 Vigna mungo
Zm00001eb019200 Zea mays
Zm00001eb093160 Zea mays
Zm00001eb121260 Zea mays
Zm00001eb196510 Zea mays
Zm00001eb278820 Zea mays
Zm00001eb405040 Zea mays

User provided reference genes

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