Gene: Sopen10g006110

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g006110
  • Transcript Identifier Sopen10g006110.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 5092742-5095200 : negative

Gene Family Information

  • ID HOM05D001792
  • #Genes/#Species 364/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g006110.1

Descriptions

  • Description Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500). | 2-isopropylmalate synthase 1 (IMS1) | FUNCTIONS IN: 2-isopropylmalate synthase activity | INVOLVED IN: leucine biosynthetic process | LOCATED IN: chloroplast, chloroplast envelope | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel , Alpha-isopropylmalate/homocitrate synthase, conserved site , 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain , Pyruvate carboxyltransferase , Bacterial 2-isopropylmalate synthase | BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009098
ISO
PLAZA Integrative Orthologyleucine biosynthetic process AT1G18500
GO:0019761
ISO
PLAZA Integrative Orthologyglucosinolate biosynthetic process AT5G23020
GO:0009625
ISO
PLAZA Integrative Orthologyresponse to insect AT5G23010
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G23010

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0003852
ISO
PLAZA Integrative Orthology2-isopropylmalate synthase activity AT1G18500
GO:0010177
ISO
PLAZA Integrative Orthology2-(2'-methylthio)ethylmalate synthase activity AT5G23020

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G18500
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G18500
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G74040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR000891 Pyruvate carboxyltransferase
Mapman id Description
50.2.3 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase