Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06170 Brassica napus
A03p09990 Brassica napus
A10p19650 Brassica napus
Aa31LG1G14260 Aethionema arabicum
Aa31LG1G28310 Aethionema arabicum
Aa31LG4G12550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2624 Anthoceros agrestis
Actinidia00104 Actinidia chinensis
Actinidia05041 Actinidia chinensis
Actinidia23375 Actinidia chinensis
Actinidia30027 Actinidia chinensis
Actinidia35381 Actinidia chinensis
Actinidia39079 Actinidia chinensis
Ah.02g128400 Amaranthus hybridus
AL6G31840 Arabidopsis lyrata
AL8G35450 Arabidopsis lyrata
Aqoxy4G02194 Aquilegia oxysepala
Aqoxy5G00041 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23MT5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3EP68E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.87NRHB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BE03Q5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CY2FVU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FFH5ZA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HIDU9Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M43Y1S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P43UC4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QDF86U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QR0RSD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UD26B0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YC4M78 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZI8G8M Arachis hypogaea
AT5G20290 Arabidopsis thaliana
AT5G59240 Arabidopsis thaliana
ATR0315G077 Amborella trichopoda
ATR0712G076 Amborella trichopoda
Atru.chr2.3645 Acer truncatum
Atru.chr6.1452 Acer truncatum
AUR62015934 Chenopodium quinoa
AUR62019552 Chenopodium quinoa
AUR62036090 Chenopodium quinoa
AUR62040675 Chenopodium quinoa
BcaB01g04793 Brassica carinata
BcaB05g22853 Brassica carinata
BcaC03g13751 Brassica carinata
BcaC04g19421 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01660 Brassica napus
BolC2t07033H Brassica oleracea
BolC3t13627H Brassica oleracea
BolC9t58458H Brassica oleracea
BraA02t05566Z Brassica rapa
BraA03t10310Z Brassica rapa
C03p11550 Brassica napus
C09p55900 Brassica napus
CAN.G181.31 Capsicum annuum
CAN.G337.37 Capsicum annuum
CAN.G439.38 Capsicum annuum
CAN.G492.29 Capsicum annuum
CAN.G874.20 Capsicum annuum
CANSAT11G1005 Cannabis sativa
CANSAT78G2073 Cannabis sativa
CARHR192540 Cardamine hirsuta
CARHR285300 Cardamine hirsuta
Carub.0006s1868 Capsella rubella
Carub.0008s1971 Capsella rubella
Ca_02560_v3 Cicer arietinum L.
Ca_03127_v3 Cicer arietinum L.
Ca_03129_v3 Cicer arietinum L.
Ca_07497_v3 Cicer arietinum L.
Ca_08217_v3 Cicer arietinum L.
Ca_14654_v3 Cicer arietinum L.
Ca_20651_v3 Cicer arietinum L.
Ca_22641_v3 Cicer arietinum L.
Ca_23205_v3 Cicer arietinum L.
Ca_27031_v3 Cicer arietinum L.
Ca_30651_v3 Cicer arietinum L.
Ca_30706_v3 Cicer arietinum L.
CBR_g32357 Chara braunii
Cc01_g16400 Coffea canephora
Cc03_g09060 Coffea canephora
Cc05_g14550 Coffea canephora
CDE02G2477 Ceratophyllum demersum
CDE02G4083 Ceratophyllum demersum
CDE05G1580 Ceratophyllum demersum
CDE08G0735 Ceratophyllum demersum
Ciclev10003097m.g Citrus clementina
Ciclev10003302m.g Citrus clementina
Ciclev10009415m.g Citrus clementina
Ciclev10032694m.g Citrus clementina
CiPaw.01G112700 Carya illinoinensis
CiPaw.01G113100 Carya illinoinensis
CiPaw.11G199500 Carya illinoinensis
CiPaw.11G199600 Carya illinoinensis
CiPaw.11G199800 Carya illinoinensis
ClCG00G002260 Citrullus lanatus
ClCG07G015630 Citrullus lanatus
ClCG08G005850 Citrullus lanatus
ClCG11G012110 Citrullus lanatus
COL.COLO4_09765 Corchorus olitorius
COL.COLO4_16126 Corchorus olitorius
Cpa.g.sc12.207 Carica papaya
Cpa.g.sc157.9 Carica papaya
Cpa.g.sc8.106 Carica papaya
Cre06.g272800 Chlamydomonas reinhardtii
CsaV3_2G008440 Cucumis sativus L.
CsaV3_6G034270 Cucumis sativus L.
CSS0009381 Camellia sinensis var. sinensis
CSS0021816 Camellia sinensis var. sinensis
CSS0026393 Camellia sinensis var. sinensis
CSS0045353 Camellia sinensis var. sinensis
CSS0049661 Camellia sinensis var. sinensis
DCAR_013207 Daucus carota
DCAR_022602 Daucus carota
DCAR_026667 Daucus carota
Dinv10298 Davidia involucrata
Dinv27175 Davidia involucrata
Dinv32172 Davidia involucrata
Dinv40825 Davidia involucrata
Duzib138G1262 Durio zibethinus
Duzib170G0756 Durio zibethinus
Duzib211G0064 Durio zibethinus
Duzib213G0601 Durio zibethinus
Duzib268G0881 Durio zibethinus
Duzib268G1142 Durio zibethinus
ECA233G1943 Erigeron canadensis
ECA240G1445 Erigeron canadensis
ECA246G2167 Erigeron canadensis
EL10Ac2g02945 Beta vulgaris
EL10Ac4g07629 Beta vulgaris
Eucgr.F00627 Eucalyptus grandis
Eucgr.H00750 Eucalyptus grandis
FAN01G0597 Fragaria x ananassa
FAN11G0223 Fragaria x ananassa
FAN11G3317 Fragaria x ananassa
FAN15G3254 Fragaria x ananassa
FAN17G1847 Fragaria x ananassa
FAN17G3060 Fragaria x ananassa
FAN21G2194 Fragaria x ananassa
FAN24G2619 Fragaria x ananassa
FAN27G2455 Fragaria x ananassa
FAN28G0732 Fragaria x ananassa
FAN28G0751 Fragaria x ananassa
FAN28G1479 Fragaria x ananassa
FAN28G2119 Fragaria x ananassa
FAN28G2518 Fragaria x ananassa
FAN28G2961 Fragaria x ananassa
FvH4_2g18130 Fragaria vesca
FvH4_3g23820 Fragaria vesca
FvH4_3g23850 Fragaria vesca
Glyma.03G086400 Glycine max
Glyma.08G325000 Glycine max
Glyma.08G346500 Glycine max
Glyma.16G087700 Glycine max
Glyma.18G084800 Glycine max
Glyma.18G157300 Glycine max
Gohir.A01G086000 Gossypium hirsutum
Gohir.A04G010000 Gossypium hirsutum
Gohir.A07G157700 Gossypium hirsutum
Gohir.A08G024600 Gossypium hirsutum
Gohir.A08G047900 Gossypium hirsutum
Gohir.A13G135500 Gossypium hirsutum
Gohir.D01G072300 Gossypium hirsutum
Gohir.D05G378000 Gossypium hirsutum
Gohir.D07G166000 Gossypium hirsutum
Gohir.D08G035100 Gossypium hirsutum
Gohir.D08G058000 Gossypium hirsutum
Gohir.D11G287865 Gossypium hirsutum
Gohir.D13G140000 Gossypium hirsutum
Gorai.002G095300 Gossypium raimondii
Gorai.004G033000 Gossypium raimondii
Gorai.004G059300 Gossypium raimondii
Gorai.007G311600 Gossypium raimondii
Gorai.009G445800 Gossypium raimondii
Gorai.013G156600 Gossypium raimondii
Gorai.N005000 Gossypium raimondii
GSVIVG01006249001 Vitis vinifera
GSVIVG01031566001 Vitis vinifera
GSVIVG01037763001 Vitis vinifera
HanXRQChr03g0076971 Helianthus annuus
HanXRQChr05g0159851 Helianthus annuus
HanXRQChr05g0159971 Helianthus annuus
HanXRQChr11g0324631 Helianthus annuus
HanXRQChr13g0408051 Helianthus annuus
Haze_03330 Corylus avellana
Haze_09773 Corylus avellana
Haze_11687 Corylus avellana
Haze_26216 Corylus avellana
Hma1.2p1_0036F.1_g022860 Hydrangea macrophylla
Hma1.2p1_0944F.1_g239960 Hydrangea macrophylla
Hma1.2p1_1234F.1_g269050 Hydrangea macrophylla
HPP92_006231 Vanilla planifolia
HPP92_014275 Vanilla planifolia
HPP92_024486 Vanilla planifolia
Hund01923 Selenicereus undatus
Hund23147 Selenicereus undatus
Lalb_Chr01g0022071 Lupinus albus
Lalb_Chr03g0041331 Lupinus albus
Lalb_Chr12g0210001 Lupinus albus
Lalb_Chr19g0125961 Lupinus albus
Lj1A883G40 Lonicera japonica
Lj1A94G37 Lonicera japonica
Lj1g0006835 Lotus japonicus
Lj1g0017516 Lotus japonicus
Lj2A1121G83 Lonicera japonica
Lj3g0012965 Lotus japonicus
Lj6g0016326 Lotus japonicus
Lsat_1_v5_gn_0_15420 Lactuca sativa
Lsat_1_v5_gn_5_3361 Lactuca sativa
Lsat_1_v5_gn_5_7581 Lactuca sativa
Lsat_1_v5_gn_6_58760 Lactuca sativa
Manes.03G134200 Manihot esculenta
Manes.12G050800 Manihot esculenta
Manes.13G052100 Manihot esculenta
Manes.15G064300 Manihot esculenta
Mapoly0122s0034 Marchantia polymorpha
MBI07_g12176_MAGBIO Magnolia biondii
MBI11_g07396_MAGBIO Magnolia biondii
MCO12G346 Micromonas commoda
MD03G1190000 Malus domestica
MD03G1202700 Malus domestica
MD04G1023100 Malus domestica
MD11G1206500 Malus domestica
MD14G1123900 Malus domestica
Medtr4g016620 Medicago truncatula
Medtr4g016663 Medicago truncatula
Medtr4g016670 Medicago truncatula
Medtr7g053450 Medicago truncatula
Medtr8g012325 Medicago truncatula
Medtr8g012330 Medicago truncatula
MELO3C004020.2 Cucumis melo
MELO3C010630.2 Cucumis melo
Migut.D02481 Erythranthe guttata
Migut.H01777 Erythranthe guttata
Migut.H01778 Erythranthe guttata
Migut.M01688 Erythranthe guttata
MSTRG.14469 Avicennia marina
MSTRG.18821 Avicennia marina
MSTRG.20984 Avicennia marina
Nitab4.5_0000296g0060 Nicotiana tabacum
Nitab4.5_0000335g0240 Nicotiana tabacum
Nitab4.5_0001160g0160 Nicotiana tabacum
Nitab4.5_0001238g0100 Nicotiana tabacum
Nitab4.5_0002167g0070 Nicotiana tabacum
Nitab4.5_0002311g0010 Nicotiana tabacum
Nitab4.5_0002671g0100 Nicotiana tabacum
Nitab4.5_0003491g0040 Nicotiana tabacum
Nitab4.5_0006376g0030 Nicotiana tabacum
Nitab4.5_0006756g0020 Nicotiana tabacum
Nitab4.5_0010102g0060 Nicotiana tabacum
Nn1g03272 Nelumbo nucifera
Nn1g07424 Nelumbo nucifera
Nn3g20119 Nelumbo nucifera
Nn8g41258 Nelumbo nucifera
Oeu005500.1 Olea europaea
Oeu005976.1 Olea europaea
Oeu019620.1 Olea europaea
Oeu034549.1 Olea europaea
Oeu054319.1 Olea europaea
Oeu056451.1 Olea europaea
Oeu057078.1 Olea europaea
Oeu057080.2 Olea europaea
Oeu062244.1 Olea europaea
Os02g0489400 Oryza sativa ssp. japonica
Os04g0349500 Oryza sativa ssp. japonica
Peaxi162Scf00285g00930 Petunia axillaris
Peaxi162Scf00487g00110 Petunia axillaris
Peaxi162Scf01069g00012 Petunia axillaris
Peaxi162Scf01133g00020 Petunia axillaris
PGR031G1005 Punica granatum
PGR083G0447 Punica granatum
PGR083G1616 Punica granatum
PGSC0003DMG400014381 Solanum tuberosum
PGSC0003DMG400020108 Solanum tuberosum
PGSC0003DMG400020637 Solanum tuberosum
PGSC0003DMG400020803 Solanum tuberosum
PGSC0003DMG400022192 Solanum tuberosum
PGSC0003DMG400036082 Solanum tuberosum
Phvul.006G051300 Phaseolus vulgaris
Phvul.008G133450 Phaseolus vulgaris
Phvul.010G024600 Phaseolus vulgaris
Potri.001G262100 Populus trichocarpa
Potri.001G360500 Populus trichocarpa
Potri.009G056900 Populus trichocarpa
Potri.017G110000 Populus trichocarpa
Pp3c12_18260 Physcomitrium patens
Pp3c13_20020 Physcomitrium patens
Pp3c19_6490 Physcomitrium patens
Pp3c21_6620 Physcomitrium patens
Pp3c22_1860 Physcomitrium patens
Pp3c4_11370 Physcomitrium patens
PRCOL_00001216 Prasinoderma coloniale
Prupe.1G172800 Prunus persica
Prupe.4G230200 Prunus persica
Psat4g204960 Pisum sativum
PSO170G6486 Papaver somniferum
PSO357G0380 Papaver somniferum
PSO541G5846 Papaver somniferum
PSO675G5844 Papaver somniferum
QL05p060663 Quercus lobata
QL06p027398 Quercus lobata
QL08p008536 Quercus lobata
QL09p049251 Quercus lobata
QL11p046535 Quercus lobata
RcHm_v2.0_Chr4g0412181 Rosa chinensis
RcHm_v2.0_Chr5g0042001 Rosa chinensis
RcHm_v2.0_Chr6g0283531 Rosa chinensis
Rhsim04G0015500 Rhododendron simsii
Rhsim13G0050700 Rhododendron simsii
Sabra09G0041700 Salix brachista
Sabra17G0092000 Salix brachista
SalBow8G0436 Salvia bowleyana
Sc03g0008110 Simmondsia chinensis
Sc07g0002930 Simmondsia chinensis
Sc13g0000560 Simmondsia chinensis
Sed0008454 Sechium edule
Sed0010917 Sechium edule
Sed0017401 Sechium edule
Sed0023524 Sechium edule
SEGI_04537 Sequoiadendron giganteum
SEGI_12211 Sequoiadendron giganteum
SEGI_14318 Sequoiadendron giganteum
SGA_v2.0_scaffold305G47965 Striga asiatica
SGA_v2.0_scaffold341G49373 Striga asiatica
SGA_v2.0_scaffold478G52229 Striga asiatica
SGA_v2.0_scaffold51G18671 Striga asiatica
SGA_v2.0_scaffold8G04377 Striga asiatica
SMO172G0140 Selaginella moellendorffii
SMO198G0015 Selaginella moellendorffii
SMO358G0724 Selaginella moellendorffii
Solyc06g007570.3 Solanum lycopersicum
Solyc06g083180.4 Solanum lycopersicum
Solyc07g065170.3 Solanum lycopersicum
Solyc09g057650.3 Solanum lycopersicum
Solyc10g006070.3 Solanum lycopersicum
Sopen06g002470 Solanum pennellii
Sopen06g034570 Solanum pennellii
Sopen07g033390 Solanum pennellii
Sopen09g021090 Solanum pennellii
Sopen10g002020 Solanum pennellii
TAR365G0391 Trochodendron aralioides
TAR624G0358 Trochodendron aralioides
TAR626G1838 Trochodendron aralioides
TAR636G2082 Trochodendron aralioides
THA.LOC104799243 Tarenaya hassleriana
THA.LOC104799634 Tarenaya hassleriana
THA.LOC104811057 Tarenaya hassleriana
THA.LOC104813382 Tarenaya hassleriana
THA.LOC104815113 Tarenaya hassleriana
Thecc.01G215100 Theobroma cacao
Thecc.07G024100 Theobroma cacao
Thecc.08G175500 Theobroma cacao
Thhalv10014589m.g Eutrema salsugineum
Thhalv10022838m.g Eutrema salsugineum
TPR.G16446 Trifolium pratense
TPR.G29161 Trifolium pratense
TWI18G0033 Tripterygium wilfordii
TWI38G0212 Tripterygium wilfordii
TWI38G0254 Tripterygium wilfordii
TWI39G0286 Tripterygium wilfordii
TWI75G0051 Tripterygium wilfordii
unitig_26.g9435 Utricularia gibba
unitig_27.g25216 Utricularia gibba
unitig_699.g19503 Utricularia gibba
unitig_749.g13594 Utricularia gibba
vmacro02801 Vaccinium macrocarpon
vmacro09676 Vaccinium macrocarpon
vmacro16022 Vaccinium macrocarpon
vmacro16040 Vaccinium macrocarpon
VMungo0331G0321 Vigna mungo
VMungo0331G1108 Vigna mungo
VMungo0540G0001 Vigna mungo
VMungo0647G1488 Vigna mungo
VMungo1383G2951 Vigna mungo
Zm00001eb028150 Zea mays
Zm00001eb041160 Zea mays
Zm00001eb125740 Zea mays
Zm00001eb135820 Zea mays
Zm00001eb145060 Zea mays
Zm00001eb176060 Zea mays
Zm00001eb183450 Zea mays
Zm00001eb205630 Zea mays
Zm00001eb205660 Zea mays
Zm00001eb205670 Zea mays
Zm00001eb205700 Zea mays
Zm00001eb205710 Zea mays
Zm00001eb252610 Zea mays
Zm00001eb373680 Zea mays

User provided reference genes

Program Settings