Gene: Zm00001eb041160
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb041160
- Transcript Identifier Zm00001eb041160_T001
- Gene Type Coding gene
- Location 1 : 216446567-216448528 : positive
Gene Family Information
- ID HOM05D001671
- #Genes/#Species 387/97
- Phylogenetic origin
- ID ORTHO05D001844
- #Genes/#Species 347/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb041160_T001
- pid Zm00001eb041160_P001
- uniprot B4FGG1
- uniprot A0A1D6I0D9
- uniprot A0A1D6PYX5
- uniprot A0A317YAE0
- entrez 100193830
- refseq NM_001138912.1
- refseq NP_001132384.1
Descriptions
- Description Zm00001e004092
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000462 | IBA | GOA Database | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0010205 | IEA | GOA Database | photoinhibition | |
| GO:0006629 | IEA | GOA Database | lipid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G20290 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20290 |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0019904 | IEA | GOA Database | protein domain specific binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT5G20290 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G20290 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G20290 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G20290 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G20290 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G20290 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G20290 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0022627 | IBA | GOA Database | cytosolic small ribosomal subunit | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009941 | IEA | GOA Database | chloroplast envelope | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.9 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS8 |