Gene: Solyc06g007570.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g007570.3
  • Transcript Identifier Solyc06g007570.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 1586606-1589094 : positive

Gene Family Information

  • ID HOM05D001671
  • #Genes/#Species 387/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g007570.3.1
  • uniprot A0A3Q7HJ03
  • gene_id Solyc06g007570

Descriptions

  • Description 40S ribosomal protein S8 (AHRD V3.3 *** Q0JDZ7_ORYSJ)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000462
IBA
GOA Databasematuration of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G20290
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20290
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G20290
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT5G20290
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G20290
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G20290
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G20290
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G20290
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G20290
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G20290
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022309 Ribosomal protein S8e/ribosomal biogenesis NSA2
IPR001047 Ribosomal protein S8e
IPR042563 Ribosomal protein S8e subdomain, eukaryotes
Mapman id Description
17.1.3.1.9 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS8