Gene: Sopen09g021090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g021090
  • Transcript Identifier Sopen09g021090.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 57923741-57926123 : negative

Gene Family Information

  • ID HOM05D001671
  • #Genes/#Species 387/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g021090.1

Descriptions

  • Description 40S ribosomal protein S8 - Zea mays (Maize), Ribosomal protein S8e family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, ribosome biogenesis | LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane | EXPRESSED IN: 11 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e , Ribosomal protein S8e, conserved site , Ribosomal protein S8e/ribosomal biogenesis NSA2: | BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0042255
ISO
PLAZA Integrative Orthologyribosome assembly Zm00001eb205630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20290
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G20290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G20290
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G20290
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G20290
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT5G20290
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G20290
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G20290
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G20290
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G20290
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT5G20290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042563 Ribosomal protein S8e subdomain, eukaryotes
IPR022309 Ribosomal protein S8e/ribosomal biogenesis NSA2
IPR001047 Ribosomal protein S8e
Mapman id Description
17.1.3.1.9 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS8