Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21390 Brassica napus
A01p37240 Brassica napus
A03p34300 Brassica napus
A03p49640 Brassica napus
A05p32640 Brassica napus
A05p41460 Brassica napus
A05p42240 Brassica napus
A06p05990 Brassica napus
A08p12360 Brassica napus
Aa31LG10G5950 Aethionema arabicum
Aa31LG1G5910 Aethionema arabicum
Aa31LG5G16180 Aethionema arabicum
Aa31LG5G17150 Aethionema arabicum
Aa31LG8G4120 Aethionema arabicum
Actinidia01502 Actinidia chinensis
Actinidia01677 Actinidia chinensis
Actinidia16869 Actinidia chinensis
Actinidia18461 Actinidia chinensis
Ah.04g158550 Amaranthus hybridus
Ah.06g196100 Amaranthus hybridus
AL1G19750 Arabidopsis lyrata
AL3G16540 Arabidopsis lyrata
AL3G17640 Arabidopsis lyrata
AL3G30080 Arabidopsis lyrata
AL7G38940 Arabidopsis lyrata
Aqoxy2G02694 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VQRD1F Arachis hypogaea
AT1G09250 Arabidopsis thaliana
AT3G05800 Arabidopsis thaliana
AT3G06590 Arabidopsis thaliana
AT3G17100 Arabidopsis thaliana
ATR0693G249 Amborella trichopoda
Atru.chr2.351 Acer truncatum
Atru.chr4.3044 Acer truncatum
AUR62016228 Chenopodium quinoa
AUR62037297 Chenopodium quinoa
BcaB03g13499 Brassica carinata
BcaB04g18369 Brassica carinata
BcaB04g19242 Brassica carinata
BcaB06g25802 Brassica carinata
BcaC01g04299 Brassica carinata
BcaC05g24777 Brassica carinata
BcaC05g24781 Brassica carinata
BcaC05g28827 Brassica carinata
BcaC05g29779 Brassica carinata
BcaC05g30087 Brassica carinata
BcaC05g30544 Brassica carinata
BcaC06g32558 Brassica carinata
BcaC06g32993 Brassica carinata
BcaC06g33459 Brassica carinata
BcaC07g37963 Brassica carinata
BcaC09g47852 Brassica carinata
BcaC09g47905 Brassica carinata
BcaC09g48663 Brassica carinata
BcaC09g50316 Brassica carinata
BcaNung00216 Brassica carinata
BNapus_Darmor_BZH_scaffold_118p00050 Brassica napus
BolC1t02614H Brassica oleracea
BolC1t04685H Brassica oleracea
BolC1t05601H Brassica oleracea
BolC1t05666H Brassica oleracea
BolC1t05671H Brassica oleracea
BolC3t16460H Brassica oleracea
BolC5t29477H Brassica oleracea
BolC5t29478H Brassica oleracea
BolC5t29484H Brassica oleracea
BolC5t33675H Brassica oleracea
BolC5t34725H Brassica oleracea
BolC5t34804H Brassica oleracea
BolC7t45296H Brassica oleracea
BolC8t48345H Brassica oleracea
BraA01t02044Z Brassica rapa
BraA01t03784Z Brassica rapa
BraA01t04430Z Brassica rapa
BraA01t04473Z Brassica rapa
BraA03t12605Z Brassica rapa
BraA03t14063Z Brassica rapa
BraA05t22088Z Brassica rapa
BraA05t22866Z Brassica rapa
BraA05t22942Z Brassica rapa
BraA06t23810Z Brassica rapa
BraA08t33219Z Brassica rapa
C01p26730 Brassica napus
C01p47160 Brassica napus
C03p41770 Brassica napus
C05p07220 Brassica napus
C05p07260 Brassica napus
C05p49340 Brassica napus
C05p60660 Brassica napus
C05p61460 Brassica napus
C07p47710 Brassica napus
CAN.G1076.26 Capsicum annuum
CAN.G114.1 Capsicum annuum
CANSAT54G1377 Cannabis sativa
CANSAT78G2092 Cannabis sativa
CARHR009230 Cardamine hirsuta
CARHR080250 Cardamine hirsuta
CARHR081130 Cardamine hirsuta
CARHR092350 Cardamine hirsuta
CARHR222540 Cardamine hirsuta
Carub.0001s0860 Capsella rubella
Carub.0003s0516 Capsella rubella
Carub.0003s0605 Capsella rubella
Carub.0003s1684 Capsella rubella
Carub.0007s2538 Capsella rubella
Ca_00973_v3 Cicer arietinum L.
Ca_10180_v3 Cicer arietinum L.
Ca_21433_v3 Cicer arietinum L.
CDE02G1081 Ceratophyllum demersum
CDE05G2597 Ceratophyllum demersum
CDE08G0183 Ceratophyllum demersum
CDE11G1155 Ceratophyllum demersum
Cfa006726 Carpinus fangiana
Cfa015291 Carpinus fangiana
Ciclev10002396m.g Citrus clementina
Ciclev10005589m.g Citrus clementina
CiPaw.01G136800 Carya illinoinensis
CiPaw.02G073700 Carya illinoinensis
CiPaw.07G030500 Carya illinoinensis
CiPaw.08G154800 Carya illinoinensis
ClCG02G014830 Citrullus lanatus
ClCG03G017760 Citrullus lanatus
ClCG06G004500 Citrullus lanatus
COL.COLO4_05540 Corchorus olitorius
COL.COLO4_34589 Corchorus olitorius
Cpa.g.sc9.41 Carica papaya
CsaV3_1G037910 Cucumis sativus L.
CsaV3_2G007180 Cucumis sativus L.
CsaV3_3G015270 Cucumis sativus L.
CsaV3_6G028530 Cucumis sativus L.
CSS0005374 Camellia sinensis var. sinensis
CSS0033923 Camellia sinensis var. sinensis
CSS0034052 Camellia sinensis var. sinensis
CSS0042572 Camellia sinensis var. sinensis
CSS0047681 Camellia sinensis var. sinensis
DCAR_023362 Daucus carota
DCAR_026988 Daucus carota
DCAR_029341 Daucus carota
DCAR_030460 Daucus carota
Dinv24470 Davidia involucrata
Dinv30901 Davidia involucrata
Dinv44271 Davidia involucrata
Duzib052G0163 Durio zibethinus
Duzib106G1997 Durio zibethinus
Duzib128G1092 Durio zibethinus
Duzib151G0821 Durio zibethinus
Duzib177G1073 Durio zibethinus
Duzib212G0422 Durio zibethinus
ECA233G4657 Erigeron canadensis
ECA246G3106 Erigeron canadensis
EL10Ac3g05525 Beta vulgaris
EL10Ac4g09473 Beta vulgaris
Eucgr.H03301 Eucalyptus grandis
FAN02G2427 Fragaria x ananassa
FAN05G0459 Fragaria x ananassa
FAN07G1694 Fragaria x ananassa
FAN09G3336 Fragaria x ananassa
FAN12G1342 Fragaria x ananassa
FAN14G5952 Fragaria x ananassa
FvH4_4g20270 Fragaria vesca
FvH4_6g07630 Fragaria vesca
Glyma.03G230800 Glycine max
Glyma.07G238300 Glycine max
Glyma.09G034500 Glycine max
Glyma.10G146300 Glycine max
Glyma.15G139200 Glycine max
Glyma.17G035200 Glycine max
Glyma.19G228000 Glycine max
Glyma.20G096100 Glycine max
Gohir.A02G055300 Gossypium hirsutum
Gohir.A08G205200 Gossypium hirsutum
Gohir.A09G240800 Gossypium hirsutum
Gohir.A10G173600 Gossypium hirsutum
Gohir.A11G274200 Gossypium hirsutum
Gohir.A13G112700 Gossypium hirsutum
Gohir.A13G176100 Gossypium hirsutum
Gohir.D01G023553 Gossypium hirsutum
Gohir.D02G060300 Gossypium hirsutum
Gohir.D08G222300 Gossypium hirsutum
Gohir.D09G241500 Gossypium hirsutum
Gohir.D10G180100 Gossypium hirsutum
Gohir.D11G284400 Gossypium hirsutum
Gohir.D13G115600 Gossypium hirsutum
Gohir.D13G182500 Gossypium hirsutum
Gorai.002G030600 Gossypium raimondii
Gorai.002G030700 Gossypium raimondii
Gorai.004G236100 Gossypium raimondii
Gorai.005G067900 Gossypium raimondii
Gorai.006G265000 Gossypium raimondii
Gorai.007G307500 Gossypium raimondii
Gorai.011G169600 Gossypium raimondii
Gorai.011G201700 Gossypium raimondii
Gorai.013G130200 Gossypium raimondii
Gorai.013G207900 Gossypium raimondii
HanXRQChr02g0048651 Helianthus annuus
HanXRQChr05g0145971 Helianthus annuus
HanXRQChr13g0395281 Helianthus annuus
Haze_01322 Corylus avellana
Haze_01323 Corylus avellana
Haze_04034 Corylus avellana
Hma1.2p1_0008F-1.1_g005490 Hydrangea macrophylla
Hma1.2p1_0013F.1_g008370 Hydrangea macrophylla
Hma1.2p1_0078F.1_g039913 Hydrangea macrophylla
Hma1.2p1_0078F.1_g039916 Hydrangea macrophylla
Hma1.2p1_2947F.1_g330660 Hydrangea macrophylla
HPP92_001231 Vanilla planifolia
HPP92_005294 Vanilla planifolia
HPP92_008832 Vanilla planifolia
HPP92_013514 Vanilla planifolia
HPP92_027393 Vanilla planifolia
Lalb_Chr02g0147731 Lupinus albus
Lalb_Chr04g0260401 Lupinus albus
Lalb_Chr07g0182021 Lupinus albus
Lalb_Chr12g0200841 Lupinus albus
Lalb_Chr13g0298541 Lupinus albus
Lalb_Chr15g0089151 Lupinus albus
Lalb_Chr18g0046101 Lupinus albus
Lalb_Chr18g0058631 Lupinus albus
Lalb_Chr20g0120761 Lupinus albus
Lalb_Chr21g0310231 Lupinus albus
Lj3P833T26 Lonicera japonica
Lj5A327T22 Lonicera japonica
Lj5g0018245 Lotus japonicus
Lj6g0015166 Lotus japonicus
Lj6P692T33 Lonicera japonica
Lju926C4T3 Lonicera japonica
Lsat_1_v5_gn_1_41680 Lactuca sativa
Lsat_1_v5_gn_6_116760 Lactuca sativa
Lsat_1_v5_gn_6_1340 Lactuca sativa
Manes.03G206200 Manihot esculenta
Manes.08G110500 Manihot esculenta
Manes.09G177600 Manihot esculenta
Manes.15G001200 Manihot esculenta
MBI07_g21783_MAGBIO Magnolia biondii
MBI07_g41312_MAGBIO Magnolia biondii
MBI10_g03530_MAGBIO Magnolia biondii
MBI19_g03260_MAGBIO Magnolia biondii
MD04G1192700 Malus domestica
MD12G1204600 Malus domestica
MD13G1150900 Malus domestica
MD16G1151400 Malus domestica
Medtr1g084160 Medicago truncatula
Medtr2g033880 Medicago truncatula
Medtr4g122500 Medicago truncatula
MELO3C006722.2 Cucumis melo
MELO3C015253.2 Cucumis melo
MELO3C016144.2 Cucumis melo
MELO3C021260.2 Cucumis melo
MELO3C027082.2 Cucumis melo
Migut.B00942 Erythranthe guttata
Migut.G00079 Erythranthe guttata
Migut.N00037 Erythranthe guttata
Migut.N00938 Erythranthe guttata
Migut.O00689 Erythranthe guttata
MSTRG.10161 Avicennia marina
MSTRG.20375 Avicennia marina
MSTRG.21764 Avicennia marina
MSTRG.24824 Avicennia marina
MSTRG.27934 Avicennia marina
MSTRG.3850 Avicennia marina
MSTRG.5143 Avicennia marina
Nitab4.5_0000177g0010 Nicotiana tabacum
Nitab4.5_0000931g0020 Nicotiana tabacum
Nitab4.5_0001338g0060 Nicotiana tabacum
Nitab4.5_0004525g0060 Nicotiana tabacum
Nn1g03672 Nelumbo nucifera
Nn3g21745 Nelumbo nucifera
Nn4g25551 Nelumbo nucifera
Nn8g40244 Nelumbo nucifera
Oeu000057.1 Olea europaea
Oeu001163.1 Olea europaea
Oeu016564.1 Olea europaea
Oeu019850.1 Olea europaea
Oeu042668.1 Olea europaea
Oeu052933.1 Olea europaea
Oeu053740.1 Olea europaea
Oeu061711.1 Olea europaea
Os03g0311600 Oryza sativa ssp. japonica
Os05g0128600 Oryza sativa ssp. japonica
Peaxi162Scf00071g00035 Petunia axillaris
Peaxi162Scf00228g00410 Petunia axillaris
PGR004G1261 Punica granatum
PGR031G3213 Punica granatum
PGR031G3268 Punica granatum
PGSC0003DMG400002796 Solanum tuberosum
PGSC0003DMG400011455 Solanum tuberosum
Phvul.001G224600 Phaseolus vulgaris
Phvul.003G116200 Phaseolus vulgaris
Phvul.006G118900 Phaseolus vulgaris
Phvul.007G202200 Phaseolus vulgaris
Potri.005G012400 Populus trichocarpa
Potri.008G103500 Populus trichocarpa
Potri.010G147400 Populus trichocarpa
Potri.013G007700 Populus trichocarpa
Prupe.1G115100 Prunus persica
Prupe.6G311800 Prunus persica
Psat0s4250g0040 Pisum sativum
Psat1g161120 Pisum sativum
Psat6g153000 Pisum sativum
PSO210G0879 Papaver somniferum
PSO478G0983 Papaver somniferum
PSO761G0557 Papaver somniferum
PSO782G5068 Papaver somniferum
QL03p014239 Quercus lobata
QL06p012685 Quercus lobata
RcHm_v2.0_Chr3g0457291 Rosa chinensis
RcHm_v2.0_Chr4g0425781 Rosa chinensis
Rhsim02G0003000 Rhododendron simsii
Rhsim04G0240500 Rhododendron simsii
Rhsim05G0127200 Rhododendron simsii
Rhsim11G0096800 Rhododendron simsii
Sabra05G0008700 Salix brachista
Sabra05G0020200 Salix brachista
Sabra08G0078200 Salix brachista
Sabra10G0113700 Salix brachista
Sabra13G0006600 Salix brachista
SalBow6G1502 Salvia bowleyana
SalBow7G3712 Salvia bowleyana
Sc06g0005740 Simmondsia chinensis
Sc16g0009100 Simmondsia chinensis
Sc19g0002970 Simmondsia chinensis
Sc25g0003220 Simmondsia chinensis
Sed0008004 Sechium edule
Sed0008149 Sechium edule
Sed0008162 Sechium edule
Sed0008229 Sechium edule
Sed0009798 Sechium edule
Sed0020485 Sechium edule
SEGI_00453 Sequoiadendron giganteum
SEGI_09603 Sequoiadendron giganteum
SEGI_22868 Sequoiadendron giganteum
SEGI_27334 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37325 Striga asiatica
SGA_v2.0_scaffold200G41307 Striga asiatica
SGA_v2.0_scaffold37G14601 Striga asiatica
SGA_v2.0_scaffold480G52294 Striga asiatica
SGA_v2.0_scaffold5G02896 Striga asiatica
SGA_v2.0_scaffold64G22101 Striga asiatica
SHI00121 Sapria himalayana
Solyc01g058670.3 Solanum lycopersicum
Solyc01g100660.4 Solanum lycopersicum
Sopen01g024510 Solanum pennellii
Sp1g07870 Schrenkiella parvula
Sp3g04660 Schrenkiella parvula
Sp3g05520 Schrenkiella parvula
Sp3g15320 Schrenkiella parvula
Sp7g14680 Schrenkiella parvula
TAR362G0129 Trochodendron aralioides
TAR365G0349 Trochodendron aralioides
TAR633G2530 Trochodendron aralioides
TAR636G0825 Trochodendron aralioides
THA.LOC104802707 Tarenaya hassleriana
THA.LOC104816863 Tarenaya hassleriana
THA.LOC104818748 Tarenaya hassleriana
THA.LOC104818877 Tarenaya hassleriana
THA.LOC104820310 Tarenaya hassleriana
THA.LOC104820593 Tarenaya hassleriana
THA.LOC104823719 Tarenaya hassleriana
THA.LOC104827462 Tarenaya hassleriana
Thecc.04G303600 Theobroma cacao
Thecc.05G324400 Theobroma cacao
Thhalv10008777m.g Eutrema salsugineum
Thhalv10021460m.g Eutrema salsugineum
Thhalv10021468m.g Eutrema salsugineum
Thhalv10021539m.g Eutrema salsugineum
Thhalv10026169m.g Eutrema salsugineum
TPR.G25408 Trifolium pratense
TPR.G2609 Trifolium pratense
TPR.G26550 Trifolium pratense
TWI09G0307 Tripterygium wilfordii
TWI36G1612 Tripterygium wilfordii
TWI53G1570 Tripterygium wilfordii
TWI56G0445 Tripterygium wilfordii
TWI73G0440 Tripterygium wilfordii
unitig_0.g2581 Utricularia gibba
unitig_32.g10663 Utricularia gibba
unitig_32.g11849 Utricularia gibba
unitig_42.g32307 Utricularia gibba
unitig_46.g18699 Utricularia gibba
unitig_52.g17274 Utricularia gibba
unitig_699.g19665 Utricularia gibba
unitig_88.g27703 Utricularia gibba
unitig_899.g14746 Utricularia gibba
vmacro01575 Vaccinium macrocarpon
vmacro08027 Vaccinium macrocarpon
vmacro15177 Vaccinium macrocarpon
vmacro19759 Vaccinium macrocarpon
VMungo0251G1840 Vigna mungo
VMungo0540G0898 Vigna mungo
VMungo0540G2409 Vigna mungo
VMungo0720G1155 Vigna mungo
VMungo1215G2746 Vigna mungo
VMungo1383G2444 Vigna mungo
Zm00001eb014980 Zea mays
Zm00001eb122320 Zea mays
Zm00001eb331270 Zea mays
Zm00001eb336960 Zea mays

User provided reference genes

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