Gene: AT3G06590

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06590
  • Transcript Identifier AT3G06590.3
  • Gene Type Coding gene
  • Location Chr3 : 2054647-2055312 : negative

Gene Family Information

  • ID HOM05D001624
  • #Genes/#Species 397/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06590.3
  • Alias AIF2,ATBS1 Interacting Factor 2,RITF1,RSA1 interacting transcription factor 1
  • uniprot Q9C8Z9

Descriptions

  • Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  • Computational description basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G17100.2); Has 284 Blast hits to 282 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 282; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009651
IMP, IEP
Gene Ontologyresponse to salt stress1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IMP
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0042542
IMP
Gene Ontologyresponse to hydrogen peroxide1
GO:0006979
IMP
Gene Ontologyresponse to oxidative stress1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding2
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding1
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity1 3
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR044549 Transcription factor IBH1-like, bHLH domain
IPR044660 Transcription factor IBH1-like
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)