Gene: AT3G17100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G17100
  • Transcript Identifier AT3G17100.1
  • Gene Type Coding gene
  • Location Chr3 : 5831552-5832244 : positive

Gene Family Information

  • ID HOM05D001624
  • #Genes/#Species 397/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G17100.1
  • Alias AIF3,ATBS1 Interacting Factor 3
  • uniprot Q9LSN7

Descriptions

  • Description sequence-specific DNA binding transcription factor
  • Computational description sequence-specific DNA binding transcription factors; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G06590.2); Has 168 Blast hits to 168 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
ISS
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding3
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044660 Transcription factor IBH1-like
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR044549 Transcription factor IBH1-like, bHLH domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)