Gene: PGSC0003DMG400011455

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400011455
  • Transcript Identifier PGSC0003DMT400029808
  • Gene Type Coding gene
  • Location ST4.03ch01 : 46926338-46927048 : positive

Gene Family Information

  • ID HOM05D001624
  • #Genes/#Species 397/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37436803
  • id PGSC0003DMG400011455.v4.03
  • uniprot M1ATF2

Descriptions

  • Description Transcription factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G06590
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G06590
GO:0009742
ISO
PLAZA Integrative Orthologybrassinosteroid mediated signaling pathway AT3G05800
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT3G06590

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G06590
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G09250
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G06590
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT3G06590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044660 Transcription factor IBH1-like
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR044549 Transcription factor IBH1-like, bHLH domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)