Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14450 Brassica napus
A09p00450 Brassica napus
A09p13790 Brassica napus
A09p15400 Brassica napus
A09p29070 Brassica napus
Aa31LG1G29520 Aethionema arabicum
Aa31LG2G860 Aethionema arabicum
Aa31LG5G500 Aethionema arabicum
Aa31LG9G620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3298 Anthoceros agrestis
Actinidia00746 Actinidia chinensis
Actinidia00747 Actinidia chinensis
Actinidia02003 Actinidia chinensis
Actinidia09144 Actinidia chinensis
Actinidia10014 Actinidia chinensis
Actinidia14565 Actinidia chinensis
Actinidia20908 Actinidia chinensis
Actinidia27380 Actinidia chinensis
Ah.08g212140 Amaranthus hybridus
AL6G43450 Arabidopsis lyrata
AL6G52990 Arabidopsis lyrata
AL7G48130 Arabidopsis lyrata
Aqoxy1G03911 Aquilegia oxysepala
Aqoxy1G03913 Aquilegia oxysepala
Aqoxy2G03301 Aquilegia oxysepala
Aqoxy7G00315 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0S0AWB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1BTX43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.26781N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.32WP8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4XX97Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7E0N0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7F9DSY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7XD9C1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C51V2Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CY9AK7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EKX8HF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GWZ248 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H7F481 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HM1IVV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J95YZQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K4K9JK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KL9P34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MP3D3D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE3H0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SWJY0L Arachis hypogaea
AT1G63650 Arabidopsis thaliana
AT4G00480 Arabidopsis thaliana
AT4G09820 Arabidopsis thaliana
AT5G41315 Arabidopsis thaliana
ATR0626G179 Amborella trichopoda
ATR0680G139 Amborella trichopoda
Atru.chr5.1424 Acer truncatum
Atru.chr5.489 Acer truncatum
Atru.chr9.2183 Acer truncatum
Atru.chr9.2184 Acer truncatum
AUR62036822 Chenopodium quinoa
AUR62038620 Chenopodium quinoa
AUR62038621 Chenopodium quinoa
AUR62043163 Chenopodium quinoa
BcaB01g01429 Brassica carinata
BcaB01g02159 Brassica carinata
BcaB01g02162 Brassica carinata
BcaB01g02254 Brassica carinata
BcaB06g27611 Brassica carinata
BcaB07g31407 Brassica carinata
BcaB07g31558 Brassica carinata
BcaC01g06877 Brassica carinata
BcaC02g08969 Brassica carinata
BcaC04g20986 Brassica carinata
BcaC04g22496 Brassica carinata
BcaC04g22497 Brassica carinata
BcaC04g22498 Brassica carinata
BcaC04g22694 Brassica carinata
BcaC04g24167 Brassica carinata
BolC3t16190H Brassica oleracea
BolC9t52977H Brassica oleracea
BolC9t54557H Brassica oleracea
BolC9t54763H Brassica oleracea
BolC9t56525H Brassica oleracea
BolC9t56526H Brassica oleracea
BraA04t17090Z Brassica rapa
BraA09t35715Z Brassica rapa
BraA09t37031Z Brassica rapa
BraA09t37182Z Brassica rapa
BraA09t38474Z Brassica rapa
C04p48350 Brassica napus
C09p00410 Brassica napus
C09p16460 Brassica napus
C09p18670 Brassica napus
C09p36950 Brassica napus
C09p36960 Brassica napus
CAN.G494.4 Capsicum annuum
CAN.G774.51 Capsicum annuum
CAN.G846.5 Capsicum annuum
CANSAT21G1225 Cannabis sativa
CANSAT25G1330 Cannabis sativa
CANSAT56G0336 Cannabis sativa
CARHR000640 Cardamine hirsuta
CARHR047690 Cardamine hirsuta
CARHR213010 Cardamine hirsuta
CARHR248590 Cardamine hirsuta
CARHR248600 Cardamine hirsuta
CARHR260810 Cardamine hirsuta
Carub.0002s0120 Capsella rubella
Carub.0006s2828 Capsella rubella
Carub.0006s3678 Capsella rubella
Carub.0007s3418 Capsella rubella
Ca_09761_v3 Cicer arietinum L.
Ca_17528_v3 Cicer arietinum L.
CBR_g45945 Chara braunii
Cc01_g19570 Coffea canephora
Cc08_g14790 Coffea canephora
CDE01G0345 Ceratophyllum demersum
CDE05G3234 Ceratophyllum demersum
CDE08G0583 Ceratophyllum demersum
CDE12G0719 Ceratophyllum demersum
Cfa006131 Carpinus fangiana
Cfa012225 Carpinus fangiana
Ciclev10019118m.g Citrus clementina
Ciclev10019219m.g Citrus clementina
Ciclev10019338m.g Citrus clementina
CiPaw.01G060900 Carya illinoinensis
CiPaw.07G092400 Carya illinoinensis
CiPaw.08G104800 Carya illinoinensis
CiPaw.11G134700 Carya illinoinensis
CiPaw.12G092700 Carya illinoinensis
ClCG06G003710 Citrullus lanatus
ClCG07G000220 Citrullus lanatus
COL.COLO4_09107 Corchorus olitorius
COL.COLO4_12711 Corchorus olitorius
COL.COLO4_34470 Corchorus olitorius
Cpa.g.sc52.26 Carica papaya
Cpa.g.sc537.2 Carica papaya
CsaV3_6G000530 Cucumis sativus L.
CsaV3_6G037080 Cucumis sativus L.
CSS0005031 Camellia sinensis var. sinensis
CSS0010962 Camellia sinensis var. sinensis
CSS0032319 Camellia sinensis var. sinensis
CSS0039120 Camellia sinensis var. sinensis
CSS0039244 Camellia sinensis var. sinensis
CSS0043247 Camellia sinensis var. sinensis
DCAR_000616 Daucus carota
DCAR_002739 Daucus carota
DCAR_004632 Daucus carota
Dinv32479 Davidia involucrata
Dinv32944 Davidia involucrata
Dinv34745 Davidia involucrata
Dinv37636 Davidia involucrata
Dinv38935 Davidia involucrata
Duzib068G0286 Durio zibethinus
Duzib084G1235 Durio zibethinus
Duzib133G0668 Durio zibethinus
Duzib138G0897 Durio zibethinus
Duzib138G1560 Durio zibethinus
Duzib205G0016 Durio zibethinus
ECA246G5235 Erigeron canadensis
ECA248G1176 Erigeron canadensis
EL10Ac1g00421 Beta vulgaris
EL10Ac7g17226 Beta vulgaris
EL10Ac7g17227 Beta vulgaris
Eucgr.D01841 Eucalyptus grandis
Eucgr.D02287 Eucalyptus grandis
Eucgr.E00624 Eucalyptus grandis
Eucgr.H01487 Eucalyptus grandis
FAN01G1009 Fragaria x ananassa
FAN03G1456 Fragaria x ananassa
FAN04G1293 Fragaria x ananassa
FAN06G0344 Fragaria x ananassa
FAN06G2348 Fragaria x ananassa
FAN08G3100 Fragaria x ananassa
FAN10G0094 Fragaria x ananassa
FAN10G3279 Fragaria x ananassa
FAN13G2820 Fragaria x ananassa
FAN15G1006 Fragaria x ananassa
FAN18G0722 Fragaria x ananassa
FAN20G2337 Fragaria x ananassa
FAN24G1029 Fragaria x ananassa
FAN27G3083 Fragaria x ananassa
FvH4_2g23700 Fragaria vesca
FvH4_5g02520 Fragaria vesca
FvH4_7g14230 Fragaria vesca
Glyma.02G147800 Glycine max
Glyma.03G009500 Glycine max
Glyma.03G152800 Glycine max
Glyma.05G208300 Glycine max
Glyma.07G071000 Glycine max
Glyma.08G014900 Glycine max
Glyma.10G026000 Glycine max
Glyma.19G155300 Glycine max
Gohir.A08G182800 Gossypium hirsutum
Gohir.A08G185800 Gossypium hirsutum
Gohir.A11G022400 Gossypium hirsutum
Gohir.A11G088700 Gossypium hirsutum
Gohir.A11G122300 Gossypium hirsutum
Gohir.D08G201300 Gossypium hirsutum
Gohir.D08G203900 Gossypium hirsutum
Gohir.D11G022100 Gossypium hirsutum
Gohir.D11G093000 Gossypium hirsutum
Gohir.D11G127600 Gossypium hirsutum
Gorai.004G212200 Gossypium raimondii
Gorai.004G215900 Gossypium raimondii
Gorai.007G023500 Gossypium raimondii
Gorai.007G099300 Gossypium raimondii
Gorai.007G136400 Gossypium raimondii
GSVIVG01011123001 Vitis vinifera
GSVIVG01019750001 Vitis vinifera
GSVIVG01026927001 Vitis vinifera
HanXRQChr06g0165851 Helianthus annuus
HanXRQChr17g0555871 Helianthus annuus
Haze_04720 Corylus avellana
Haze_08785 Corylus avellana
Haze_15498 Corylus avellana
Hma1.2p1_0209F.1_g088790 Hydrangea macrophylla
HPP92_008507 Vanilla planifolia
Hund11466 Selenicereus undatus
Hund27278 Selenicereus undatus
Lalb_Chr05g0224731 Lupinus albus
Lalb_Chr10g0097001 Lupinus albus
Lalb_Chr10g0097011 Lupinus albus
Lalb_Chr16g0390021 Lupinus albus
Lalb_Chr17g0339661 Lupinus albus
Lalb_Chr17g0339671 Lupinus albus
Lalb_Chr21g0306491 Lupinus albus
Lj1C46T5 Lonicera japonica
Lj2C0G11 Lonicera japonica
Lj2C1174T10 Lonicera japonica
Lj2C185G6 Lonicera japonica
Lj2P1174T28 Lonicera japonica
Lj3g0022326 Lotus japonicus
Lj4g0020907 Lotus japonicus
Lj5g0022580 Lotus japonicus
Lj7C513T12 Lonicera japonica
Lj8A221T74 Lonicera japonica
Lsat_1_v5_gn_3_6560 Lactuca sativa
Lsat_1_v5_gn_5_190001 Lactuca sativa
Manes.01G059300 Manihot esculenta
Manes.01G208400 Manihot esculenta
Manes.01G257200 Manihot esculenta
Manes.02G019350 Manihot esculenta
Manes.05G034700 Manihot esculenta
Manes.05G075400 Manihot esculenta
Mapoly0031s0161 Marchantia polymorpha
Mapoly0098s0046 Marchantia polymorpha
MapolyY_A0030 Marchantia polymorpha
MBI18_g04357_MAGBIO Magnolia biondii
MBI19_g42513_MAGBIO Magnolia biondii
MD01G1060200 Malus domestica
MD03G1266300 Malus domestica
MD06G1084400 Malus domestica
MD07G1137500 Malus domestica
MD11G1286900 Malus domestica
MD14G1105500 Malus domestica
Medtr1g072320 Medicago truncatula
Medtr7g078400 Medicago truncatula
Medtr8g098275 Medicago truncatula
MELO3C021212.2 Cucumis melo
MELO3C031072.2 Cucumis melo
MELO3C031122.2 Cucumis melo
Migut.A00733 Erythranthe guttata
Migut.D00287 Erythranthe guttata
Migut.E01090 Erythranthe guttata
MSTRG.11982 Avicennia marina
MSTRG.21566 Avicennia marina
MSTRG.25615 Avicennia marina
MSTRG.25616 Avicennia marina
Nitab4.5_0001028g0030 Nicotiana tabacum
Nitab4.5_0001615g0130 Nicotiana tabacum
Nitab4.5_0010448g0010 Nicotiana tabacum
Nitab4.5_0010448g0020 Nicotiana tabacum
Nitab4.5_0016536g0010 Nicotiana tabacum
Nn1g01527 Nelumbo nucifera
Nn1g02196 Nelumbo nucifera
Nn4g26227 Nelumbo nucifera
Nn6g33430 Nelumbo nucifera
Oeu007750.1 Olea europaea
Oeu009149.1 Olea europaea
Oeu019185.1 Olea europaea
Oeu047878.1 Olea europaea
Os01g0575701 Oryza sativa ssp. japonica
Os01g0576100 Oryza sativa ssp. japonica
Os01g0577300 Oryza sativa ssp. japonica
Os04g0557200 Oryza sativa ssp. japonica
Os04g0557500 Oryza sativa ssp. japonica
Os04g0557800 Oryza sativa ssp. japonica
Os07g0211500 Oryza sativa ssp. japonica
Os11g0258700 Oryza sativa ssp. japonica
Peaxi162Scf00119g00942 Petunia axillaris
Peaxi162Scf00338g00912 Petunia axillaris
PGR031G3019 Punica granatum
PGR031G3769 Punica granatum
PGR042G1989 Punica granatum
PGR119G0019 Punica granatum
PGR119G1112 Punica granatum
PGSC0003DMG400012891 Solanum tuberosum
PGSC0003DMG401012339 Solanum tuberosum
Phvul.001G150300 Phaseolus vulgaris
Phvul.002G290000 Phaseolus vulgaris
Phvul.007G171333 Phaseolus vulgaris
Phvul.010G098500 Phaseolus vulgaris
Potri.001G103600 Populus trichocarpa
Potri.002G054100 Populus trichocarpa
Potri.002G159400 Populus trichocarpa
Potri.003G128000 Populus trichocarpa
Potri.005G208600 Populus trichocarpa
Potri.014G083900 Populus trichocarpa
Pp3c21_15150 Physcomitrium patens
Pp3c22_2930 Physcomitrium patens
Prupe.2G170100 Prunus persica
Prupe.5G100700 Prunus persica
Prupe.8G242100 Prunus persica
Psat6g060480 Pisum sativum
Psat7g032960 Pisum sativum
PSO170G2885 Papaver somniferum
PSO302G0086 Papaver somniferum
PSO478G3902 Papaver somniferum
PSO782G0939 Papaver somniferum
QL08p048868 Quercus lobata
QL12p022039 Quercus lobata
QL12p032851 Quercus lobata
RcHm_v2.0_Chr1g0355211 Rosa chinensis
RcHm_v2.0_Chr6g0291161 Rosa chinensis
RcHm_v2.0_Chr7g0197531 Rosa chinensis
Rhsim02G0231600 Rhododendron simsii
Rhsim07G0015600 Rhododendron simsii
Rhsim13G0024200 Rhododendron simsii
Sabra01G0078300 Salix brachista
Sabra02G0044000 Salix brachista
Sabra02G0126600 Salix brachista
Sabra03G0091100 Salix brachista
Sabra05G0158700 Salix brachista
Sabra14G0060900 Salix brachista
SalBow1G2192 Salvia bowleyana
SalBow4G2550 Salvia bowleyana
SalBow4G3030 Salvia bowleyana
Sc01g0003410 Simmondsia chinensis
Sc01g0009610 Simmondsia chinensis
Sc05g0004930 Simmondsia chinensis
Sed0005516 Sechium edule
Sed0014653 Sechium edule
SEGI_14115 Sequoiadendron giganteum
SEGI_18479 Sequoiadendron giganteum
SEGI_21853 Sequoiadendron giganteum
SEGI_26060 Sequoiadendron giganteum
SEGI_28197 Sequoiadendron giganteum
SEGI_33460 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05805 Striga asiatica
SGA_v2.0_scaffold173G39176 Striga asiatica
SGA_v2.0_scaffold479G52242 Striga asiatica
SHI07140 Sapria himalayana
SHI14547 Sapria himalayana
SMO367G0255 Selaginella moellendorffii
Solyc08g081140.4 Solanum lycopersicum
Solyc09g065100.3 Solanum lycopersicum
Sopen08g029440 Solanum pennellii
Sopen09g026820 Solanum pennellii
Sp2g01010 Schrenkiella parvula
Sp6g00520 Schrenkiella parvula
Sp6g07700 Schrenkiella parvula
Sp7g00630 Schrenkiella parvula
SpUn0010_0110 Schrenkiella parvula
TAR365G0648 Trochodendron aralioides
TAR374G0290 Trochodendron aralioides
TAR374G1544 Trochodendron aralioides
TAR375G0580 Trochodendron aralioides
TAR629G3280 Trochodendron aralioides
TAR633G0916 Trochodendron aralioides
TAR636G3424 Trochodendron aralioides
THA.LOC104801584 Tarenaya hassleriana
THA.LOC104814104 Tarenaya hassleriana
THA.LOC104817624 Tarenaya hassleriana
THA.LOC104817999 Tarenaya hassleriana
THA.LOC104823586 Tarenaya hassleriana
Thecc.01G280500 Theobroma cacao
Thecc.01G359500 Theobroma cacao
Thecc.03G279300 Theobroma cacao
Thhalv10023356m.g Eutrema salsugineum
Thhalv10027709m.g Eutrema salsugineum
Thhalv10028584m.g Eutrema salsugineum
Thhalv10029523m.g Eutrema salsugineum
TPR.G12931 Trifolium pratense
TPR.G9117 Trifolium pratense
TWI14G1132 Tripterygium wilfordii
TWI15G0365 Tripterygium wilfordii
TWI59G0241 Tripterygium wilfordii
TWI81G0152 Tripterygium wilfordii
unitig_0.g2858 Utricularia gibba
unitig_46.g18550 Utricularia gibba
unitig_88.g27617 Utricularia gibba
vmacro02564 Vaccinium macrocarpon
vmacro11362 Vaccinium macrocarpon
vmacro13285 Vaccinium macrocarpon
vmacro22818 Vaccinium macrocarpon
VMungo0251G3445 Vigna mungo
VMungo0331G1360 Vigna mungo
VMungo0720G2502 Vigna mungo
VMungo1127G2007 Vigna mungo
VMungo1383G0857 Vigna mungo
Zm00001eb074320 Zea mays
Zm00001eb303250 Zea mays
Zm00001eb429330 Zea mays

User provided reference genes

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