Gene: Sopen09g026820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g026820
  • Transcript Identifier Sopen09g026820.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 74289545-74296044 : positive

Gene Family Information

  • ID HOM05D001604
  • #Genes/#Species 401/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g026820.1

Descriptions

  • Description TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. | TRANSPARENT TESTA 8 (TT8) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: trichome differentiation, regulation of flavonoid biosynthetic process, regulation of proanthocyanidin biosynthetic process | LOCATED IN: nucleus | EXPRESSED IN: stem, hypocotyl, micropylar endosperm | EXPRESSED DURING: C globular stage | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009962
ISO
PLAZA Integrative Orthologyregulation of flavonoid biosynthetic process AT4G09820
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G09820
GO:0031542
ISO
PLAZA Integrative Orthologypositive regulation of anthocyanin biosynthetic process AT4G09820
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT4G09820
GO:2000029
ISO
PLAZA Integrative Orthologyregulation of proanthocyanidin biosynthetic process AT4G09820
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT4G09820
GO:0010026
ISO
PLAZA Integrative Orthologytrichome differentiation AT4G09820

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G09820
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G09820

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025610 Transcription factor MYC/MYB N-terminal
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)