Gene: AT4G00480

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G00480
  • Transcript Identifier AT4G00480.1
  • Gene Type Coding gene
  • Location Chr4 : 217106-219684 : negative

Gene Family Information

  • ID HOM05D001604
  • #Genes/#Species 401/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G00480.1
  • symbol ATMYC1
  • uniprot C0SVG1

Descriptions

  • Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  • Computational description ATMYC1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 1473 Blast hits to 1082 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048629
IMP
Gene Ontologytrichome patterning1
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR025610 Transcription factor MYC/MYB N-terminal
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)