Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13490 Brassica napus
A03p53300 Brassica napus
A03p53330 Brassica napus
A08p15610 Brassica napus
A08p23830 Brassica napus
Aa31LG6G16160 Aethionema arabicum
Aa31LG6G4290 Aethionema arabicum
Aa31LG9G9890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1626 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4042 Anthoceros agrestis
Actinidia00559 Actinidia chinensis
Actinidia02335 Actinidia chinensis
Actinidia03598 Actinidia chinensis
Actinidia10805 Actinidia chinensis
Actinidia11753 Actinidia chinensis
Actinidia26882 Actinidia chinensis
Ah.01g019070 Amaranthus hybridus
Ah.09g234530 Amaranthus hybridus
Ah.14g087850 Amaranthus hybridus
AL6G47850 Arabidopsis lyrata
AL7G11030 Arabidopsis lyrata
AL7G31550 Arabidopsis lyrata
Aqoxy1G02963 Aquilegia oxysepala
Aqoxy1G03479 Aquilegia oxysepala
Aqoxy6G01228 Aquilegia oxysepala
Aqoxy6G01335 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6T9XFP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LDTM0X Arachis hypogaea
AT4G04260 Arabidopsis thaliana
AT4G22140 Arabidopsis thaliana
AT4G39100 Arabidopsis thaliana
ATR0178G017 Amborella trichopoda
ATR0665G569 Amborella trichopoda
Atru.chr10.2277 Acer truncatum
Atru.chr5.3101 Acer truncatum
Atru.chr6.3239 Acer truncatum
AUR62011278 Chenopodium quinoa
AUR62012756 Chenopodium quinoa
AUR62016780 Chenopodium quinoa
AUR62021902 Chenopodium quinoa
BcaB03g12242 Brassica carinata
BcaC01g00281 Brassica carinata
BcaC01g00767 Brassica carinata
BcaC09g51158 Brassica carinata
BcaNung00810 Brassica carinata
BcaNung01705 Brassica carinata
BcaNung03760 Brassica carinata
BolC1t01583H Brassica oleracea
BolC3t20017H Brassica oleracea
BolC3t20685H Brassica oleracea
BolC7t45657H Brassica oleracea
BraA01t01290Z Brassica rapa
BraA03t14398Z Brassica rapa
BraA08t33541Z Brassica rapa
BraA08t34335Z Brassica rapa
C01p16320 Brassica napus
C03p77600 Brassica napus
C03p84060 Brassica napus
C07p51600 Brassica napus
C07p51620 Brassica napus
CAN.G1014.47 Capsicum annuum
CAN.G124.19 Capsicum annuum
CAN.G1544.15 Capsicum annuum
CAN.G500.50 Capsicum annuum
CAN.G664.9 Capsicum annuum
CANSAT11G0682 Cannabis sativa
CANSAT56G0984 Cannabis sativa
CANSAT64G0963 Cannabis sativa
CARHR228970 Cardamine hirsuta
CARHR247650 Cardamine hirsuta
CARHR253170 Cardamine hirsuta
CARHR253190 Cardamine hirsuta
CARHR253230 Cardamine hirsuta
Carub.0006s3214 Capsella rubella
Carub.0007s0097 Capsella rubella
Carub.0007s1918 Capsella rubella
Ca_04022_v3 Cicer arietinum L.
Ca_15346_v3 Cicer arietinum L.
Ca_23059_v3 Cicer arietinum L.
Ca_30249_v3 Cicer arietinum L.
CBR_g22237 Chara braunii
Cc02_g17160 Coffea canephora
Cc05_g03190 Coffea canephora
Cc09_g01200 Coffea canephora
Cc09_g01220 Coffea canephora
CDE03G0345 Ceratophyllum demersum
CDE04G3127 Ceratophyllum demersum
CDE04G3290 Ceratophyllum demersum
CDE06G1266 Ceratophyllum demersum
CDE06G1450 Ceratophyllum demersum
CDE07G0690 Ceratophyllum demersum
Cfa000164 Carpinus fangiana
Ciclev10016559m.g Citrus clementina
Ciclev10016569m.g Citrus clementina
Ciclev10029260m.g Citrus clementina
CiPaw.05G070700 Carya illinoinensis
CiPaw.06G131800 Carya illinoinensis
CiPaw.06G132100 Carya illinoinensis
CiPaw.09G097600 Carya illinoinensis
CiPaw.09G097900 Carya illinoinensis
ClCG01G009700 Citrullus lanatus
ClCG02G002180 Citrullus lanatus
ClCG02G004750 Citrullus lanatus
COL.COLO4_21858 Corchorus olitorius
COL.COLO4_21859 Corchorus olitorius
COL.COLO4_31829 Corchorus olitorius
Cpa.g.sc132.8 Carica papaya
Cpa.g.sc150.56 Carica papaya
Cpa.g.sc152.54 Carica papaya
Cre16.g675246 Chlamydomonas reinhardtii
CsaV3_1G046090 Cucumis sativus L.
CsaV3_7G000170 Cucumis sativus L.
CsaV3_7G003320 Cucumis sativus L.
CSS0003402 Camellia sinensis var. sinensis
CSS0017351 Camellia sinensis var. sinensis
CSS0021127 Camellia sinensis var. sinensis
CSS0028474 Camellia sinensis var. sinensis
CSS0035384 Camellia sinensis var. sinensis
CSS0049509 Camellia sinensis var. sinensis
DCAR_021147 Daucus carota
Dinv08735 Davidia involucrata
Dinv13937 Davidia involucrata
Dinv23482 Davidia involucrata
Dinv39739 Davidia involucrata
Dinv42029 Davidia involucrata
Duzib052G0857 Durio zibethinus
Duzib132G0595 Durio zibethinus
Duzib133G0817 Durio zibethinus
Duzib138G1617 Durio zibethinus
Duzib160G0407 Durio zibethinus
Duzib192G0159 Durio zibethinus
Duzib211G0233 Durio zibethinus
Duzib235G0939 Durio zibethinus
ECA234G2745 Erigeron canadensis
ECA236G4420 Erigeron canadensis
ECA248G0912 Erigeron canadensis
EL10Ac8g20127 Beta vulgaris
EL10Ac9g21685 Beta vulgaris
Eucgr.A01099 Eucalyptus grandis
Eucgr.D01362 Eucalyptus grandis
Eucgr.I01296 Eucalyptus grandis
Eucgr.K00769 Eucalyptus grandis
FAN02G4010 Fragaria x ananassa
FAN05G3623 Fragaria x ananassa
FAN09G2026 Fragaria x ananassa
FAN14G1301 Fragaria x ananassa
FAN14G3664 Fragaria x ananassa
FAN15G0039 Fragaria x ananassa
FAN18G0568 Fragaria x ananassa
FAN20G2776 Fragaria x ananassa
FAN21G0890 Fragaria x ananassa
FAN21G3076 Fragaria x ananassa
FAN24G0427 Fragaria x ananassa
FAN25G2248 Fragaria x ananassa
FAN27G0826 Fragaria x ananassa
FvH4_2g09891 Fragaria vesca
FvH4_3g01411 Fragaria vesca
FvH4_3g01430 Fragaria vesca
FvH4_5g27440 Fragaria vesca
FvH4_6g42580 Fragaria vesca
Glyma.04G009500 Glycine max
Glyma.06G009400 Glycine max
Glyma.06G233300 Glycine max
Glyma.12G158800 Glycine max
Glyma.12G227900 Glycine max
Glyma.13G272200 Glycine max
Gohir.A01G004100 Gossypium hirsutum
Gohir.A03G197400 Gossypium hirsutum
Gohir.A05G172900 Gossypium hirsutum
Gohir.A06G150900 Gossypium hirsutum
Gohir.A07G186825 Gossypium hirsutum
Gohir.A07G186900 Gossypium hirsutum
Gohir.A09G068400 Gossypium hirsutum
Gohir.A13G031800 Gossypium hirsutum
Gohir.D01G004100 Gossypium hirsutum
Gohir.D02G218700 Gossypium hirsutum
Gohir.D05G175900 Gossypium hirsutum
Gohir.D06G157100 Gossypium hirsutum
Gohir.D07G193400 Gossypium hirsutum
Gohir.D09G068100 Gossypium hirsutum
Gohir.D13G029800 Gossypium hirsutum
Gorai.001G216500 Gossypium raimondii
Gorai.002G005000 Gossypium raimondii
Gorai.005G246700 Gossypium raimondii
Gorai.006G082500 Gossypium raimondii
Gorai.009G181300 Gossypium raimondii
Gorai.010G183600 Gossypium raimondii
Gorai.013G034100 Gossypium raimondii
GSVIVG01004809001 Vitis vinifera
GSVIVG01024220001 Vitis vinifera
GSVIVG01030487001 Vitis vinifera
HanXRQChr01g0006521 Helianthus annuus
HanXRQChr03g0075611 Helianthus annuus
HanXRQChr04g0126931 Helianthus annuus
HanXRQChr08g0222671 Helianthus annuus
HanXRQChr08g0222691 Helianthus annuus
HanXRQChr08g0222801 Helianthus annuus
HanXRQChr10g0282071 Helianthus annuus
HanXRQChr10g0306971 Helianthus annuus
HanXRQChr11g0321611 Helianthus annuus
HanXRQChr12g0381041 Helianthus annuus
HanXRQChr12g0381051 Helianthus annuus
HanXRQChr12g0381061 Helianthus annuus
HanXRQChr16g0506441 Helianthus annuus
HanXRQChr16g0506641 Helianthus annuus
HanXRQChr16g0506651 Helianthus annuus
Haze_02318 Corylus avellana
Haze_06855 Corylus avellana
Haze_12782 Corylus avellana
Hma1.2p1_0298F.1_g117480 Hydrangea macrophylla
Hma1.2p1_0445F.1_g154481 Hydrangea macrophylla
Hma1.2p1_2381F.1_g321040 Hydrangea macrophylla
HPP92_003059 Vanilla planifolia
HPP92_003729 Vanilla planifolia
HPP92_011650 Vanilla planifolia
Hund00237 Selenicereus undatus
Hund06248 Selenicereus undatus
Hund21435 Selenicereus undatus
Hund23434 Selenicereus undatus
Lalb_Chr01g0006691 Lupinus albus
Lalb_Chr01g0016731 Lupinus albus
Lalb_Chr03g0030881 Lupinus albus
Lalb_Chr03g0030991 Lupinus albus
Lalb_Chr03g0031001 Lupinus albus
Lalb_Chr19g0133981 Lupinus albus
Lalb_Chr20g0109381 Lupinus albus
Lalb_Chr20g0109391 Lupinus albus
Lalb_Chr20g0109401 Lupinus albus
Lalb_Chr20g0109411 Lupinus albus
Lalb_Chr23g0265231 Lupinus albus
Lalb_Chr25g0286081 Lupinus albus
Lalb_Chr25g0286101 Lupinus albus
Lalb_Chr25g0286111 Lupinus albus
Lalb_Chr25g0286121 Lupinus albus
Lj1A779T45 Lonicera japonica
Lj1A779T46 Lonicera japonica
Lj1g0017168 Lotus japonicus
Lj3g0007501 Lotus japonicus
Lj3g0026099 Lotus japonicus
Lj5g0027904 Lotus japonicus
Lj8A129G85 Lonicera japonica
Lj9A378G55 Lonicera japonica
Lsat_1_v5_gn_0_23001 Lactuca sativa
Lsat_1_v5_gn_5_120381 Lactuca sativa
Lsat_1_v5_gn_7_91740 Lactuca sativa
Lsat_1_v5_gn_7_92661 Lactuca sativa
Lsat_1_v5_gn_9_106641 Lactuca sativa
Lsat_1_v5_gn_9_11060 Lactuca sativa
Manes.04G086100 Manihot esculenta
Manes.12G070900 Manihot esculenta
Manes.12G071000 Manihot esculenta
Manes.12G071100 Manihot esculenta
Manes.17G027500 Manihot esculenta
Mapoly0035s0096 Marchantia polymorpha
Mapoly0041s0133 Marchantia polymorpha
Mapoly0041s0134 Marchantia polymorpha
Mapoly0059s0010 Marchantia polymorpha
Mapoly0180s0005 Marchantia polymorpha
MBI01_g12896_MAGBIO Magnolia biondii
MCO01G109 Micromonas commoda
MD05G1059600 Malus domestica
MD05G1352300 Malus domestica
MD09G1112400 Malus domestica
MD10G1067700 Malus domestica
MD10G1326300 Malus domestica
MD11G1102600 Malus domestica
MD11G1102700 Malus domestica
MD16G1275400 Malus domestica
MD17G1102500 Malus domestica
Medtr2g078310 Medicago truncatula
Medtr2g090365 Medicago truncatula
Medtr3g117270 Medicago truncatula
Medtr3g117280 Medicago truncatula
MELO3C013440.2 Cucumis melo
MELO3C018842.2 Cucumis melo
MELO3C021722.2 Cucumis melo
MELO3C035601.2 Cucumis melo
Migut.B00203 Erythranthe guttata
Migut.H01589 Erythranthe guttata
Migut.K00945 Erythranthe guttata
Migut.M00425 Erythranthe guttata
Migut.M01371 Erythranthe guttata
Migut.N01263 Erythranthe guttata
MSTRG.14626 Avicennia marina
MSTRG.16831 Avicennia marina
MSTRG.20059 Avicennia marina
MSTRG.6586 Avicennia marina
Nitab4.5_0000019g0410 Nicotiana tabacum
Nitab4.5_0000482g0110 Nicotiana tabacum
Nitab4.5_0000622g0060 Nicotiana tabacum
Nitab4.5_0000713g0140 Nicotiana tabacum
Nitab4.5_0001409g0230 Nicotiana tabacum
Nitab4.5_0002852g0030 Nicotiana tabacum
Nitab4.5_0003449g0060 Nicotiana tabacum
Nitab4.5_0004644g0070 Nicotiana tabacum
Nitab4.5_0005372g0100 Nicotiana tabacum
Nitab4.5_0005919g0040 Nicotiana tabacum
Nitab4.5_0007959g0020 Nicotiana tabacum
Nitab4.5_0009512g0030 Nicotiana tabacum
Nitab4.5_0011074g0020 Nicotiana tabacum
Nitab4.5_0013070g0030 Nicotiana tabacum
Nn007s41418 Nelumbo nucifera
Nn1g03396 Nelumbo nucifera
Nn1g07266 Nelumbo nucifera
Nn5g29144 Nelumbo nucifera
Oeu005600.1 Olea europaea
Oeu005601.1 Olea europaea
Oeu020726.1 Olea europaea
Oeu046142.1 Olea europaea
Os03g0799600 Oryza sativa ssp. japonica
Os07g0186400 Oryza sativa ssp. japonica
Os08g0421900 Oryza sativa ssp. japonica
Os09g0386500 Oryza sativa ssp. japonica
Peaxi162Scf00016g00354 Petunia axillaris
Peaxi162Scf00047g02038 Petunia axillaris
Peaxi162Scf00178g00015 Petunia axillaris
Peaxi162Scf00178g00113 Petunia axillaris
Peaxi162Scf00708g00037 Petunia axillaris
Peaxi162Scf00921g00134 Petunia axillaris
PGR004G0932 Punica granatum
PGR142G2498 Punica granatum
PGSC0003DMG400000673 Solanum tuberosum
PGSC0003DMG400016712 Solanum tuberosum
PGSC0003DMG400030955 Solanum tuberosum
PGSC0003DMG400040868 Solanum tuberosum
PGSC0003DMG401017043 Solanum tuberosum
Phvul.009G004500 Phaseolus vulgaris
Phvul.011G157300 Phaseolus vulgaris
Phvul.011G158300 Phaseolus vulgaris
Potri.002G226000 Populus trichocarpa
Potri.004G004900 Populus trichocarpa
Potri.004G159900 Populus trichocarpa
Potri.006G270601 Populus trichocarpa
Potri.009G121000 Populus trichocarpa
Potri.011G010901 Populus trichocarpa
Potri.014G157100 Populus trichocarpa
Pp3c12_7090 Physcomitrium patens
Pp3c13_4600 Physcomitrium patens
Pp3c13_4610 Physcomitrium patens
Pp3c1_31190 Physcomitrium patens
Pp3c2_7400 Physcomitrium patens
Pp3c2_7410 Physcomitrium patens
Pp3c4_21200 Physcomitrium patens
Pp3c6_15430 Physcomitrium patens
Pp3c9_19210 Physcomitrium patens
PRCOL_00001946 Prasinoderma coloniale
Prupe.2G036000 Prunus persica
Prupe.3G212300 Prunus persica
Prupe.4G015400 Prunus persica
Prupe.8G089400 Prunus persica
Psat4g160000 Pisum sativum
Psat5g005240 Pisum sativum
Psat5g240840 Pisum sativum
Psat5g272240 Pisum sativum
PSO170G3358 Papaver somniferum
PSO541G3814 Papaver somniferum
PSO541G6389 Papaver somniferum
PSO675G4965 Papaver somniferum
PSO675G6770 Papaver somniferum
QL03p004909 Quercus lobata
QL03p004917 Quercus lobata
QL05p071985 Quercus lobata
QL11p045401 Quercus lobata
RcHm_v2.0_Chr2g0158431 Rosa chinensis
RcHm_v2.0_Chr4g0405951 Rosa chinensis
RcHm_v2.0_Chr5g0002141 Rosa chinensis
RcHm_v2.0_Chr5g0002181 Rosa chinensis
RcHm_v2.0_Chr6g0266611 Rosa chinensis
RcHm_v2.0_Chr6g0266801 Rosa chinensis
RcHm_v2.0_Chr7g0220201 Rosa chinensis
RcHm_v2.0_Chr7g0220211 Rosa chinensis
RcHm_v2.0_Chr7g0220441 Rosa chinensis
RcHm_v2.0_Chr7g0220461 Rosa chinensis
RcHm_v2.0_Chr7g0240861 Rosa chinensis
Rhsim04G0051400 Rhododendron simsii
Rhsim05G0070600 Rhododendron simsii
Rhsim06G0166400 Rhododendron simsii
Rhsim11G0073500 Rhododendron simsii
Rhsim13G0150300 Rhododendron simsii
Sabra02G0172900 Salix brachista
Sabra04G0002600 Salix brachista
Sabra04G0106900 Salix brachista
Sabra09G0093400 Salix brachista
Sabra11G0008200 Salix brachista
Sabra14G0118900 Salix brachista
Sc08g0000690 Simmondsia chinensis
Sc17g0007570 Simmondsia chinensis
Sc24g0000250 Simmondsia chinensis
Sed0005303 Sechium edule
Sed0006185 Sechium edule
Sed0011056 Sechium edule
Sed0017186 Sechium edule
Sed0018437 Sechium edule
SEGI_20868 Sequoiadendron giganteum
SEGI_21556 Sequoiadendron giganteum
SEGI_29983 Sequoiadendron giganteum
SEGI_33250 Sequoiadendron giganteum
SEGI_38364 Sequoiadendron giganteum
SEGI_39469 Sequoiadendron giganteum
SGA_v2.0_scaffold125G33754 Striga asiatica
SGA_v2.0_scaffold49G18248 Striga asiatica
SGA_v2.0_scaffold49G18348 Striga asiatica
SGA_v2.0_scaffold58G20495 Striga asiatica
SHI05570 Sapria himalayana
SHI10268 Sapria himalayana
SMO137G0250 Selaginella moellendorffii
SMO196G0270 Selaginella moellendorffii
Solyc01g110020.4 Solanum lycopersicum
Solyc02g081130.3 Solanum lycopersicum
Solyc05g042030.3 Solanum lycopersicum
Solyc07g049210.3 Solanum lycopersicum
Sopen01g052210 Solanum pennellii
Sopen02g025770 Solanum pennellii
Sopen05g026040 Solanum pennellii
Sopen07g025220 Solanum pennellii
Sp6g04540 Schrenkiella parvula
Sp7g20290 Schrenkiella parvula
Sp7g36730 Schrenkiella parvula
TAR068G0001 Trochodendron aralioides
TAR094G0003 Trochodendron aralioides
TAR376G0046 Trochodendron aralioides
TAR381G1699 Trochodendron aralioides
TAR626G0820 Trochodendron aralioides
TAR627G0597 Trochodendron aralioides
TAR627G0838 Trochodendron aralioides
TAR628G0343 Trochodendron aralioides
TAR629G1404 Trochodendron aralioides
THA.LOC104806316 Tarenaya hassleriana
THA.LOC104809479 Tarenaya hassleriana
THA.LOC104813414 Tarenaya hassleriana
THA.LOC104818627 Tarenaya hassleriana
THA.LOC104823537 Tarenaya hassleriana
Thecc.01G180600 Theobroma cacao
Thecc.02G079200 Theobroma cacao
Thecc.06G227800 Theobroma cacao
Thhalv10026157m.g Eutrema salsugineum
Thhalv10026181m.g Eutrema salsugineum
Thhalv10028947m.g Eutrema salsugineum
TPR.G15713 Trifolium pratense
TPR.G19998 Trifolium pratense
TPR.G22996 Trifolium pratense
TPR.G22998 Trifolium pratense
TPR.G29645 Trifolium pratense
TPR.G32180 Trifolium pratense
TWI18G0084 Tripterygium wilfordii
TWI38G0938 Tripterygium wilfordii
TWI38G1121 Tripterygium wilfordii
TWI63G1129 Tripterygium wilfordii
TWI75G1013 Tripterygium wilfordii
TWI79G1665 Tripterygium wilfordii
unitig_0.g56 Utricularia gibba
unitig_60.g25862 Utricularia gibba
unitig_699.g19624 Utricularia gibba
unitig_85.g27309 Utricularia gibba
vmacro03666 Vaccinium macrocarpon
vmacro09353 Vaccinium macrocarpon
vmacro12173 Vaccinium macrocarpon
vmacro17454 Vaccinium macrocarpon
VMungo0263G0001 Vigna mungo
VMungo1127G0949 Vigna mungo
VMungo1127G1823 Vigna mungo
VMungo1309G2885 Vigna mungo
Zm00001eb041990 Zea mays
Zm00001eb099070 Zea mays
Zm00001eb179130 Zea mays
Zm00001eb302190 Zea mays
Zm00001eb311820 Zea mays

User provided reference genes

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