Gene: Sopen01g052210

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g052210
  • Transcript Identifier Sopen01g052210.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107676907-107682798 : positive

Gene Family Information

  • ID HOM05D001347
  • #Genes/#Species 467/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g052210.1

Descriptions

  • Description EARLY BOLTING IN SHORT DAYS (EBS) | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Bromo adjacent homology (BAH) domain , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035067
ISO
PLAZA Integrative Orthologynegative regulation of histone acetylation AT4G39100
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT4G39100
GO:0009791
ISO
PLAZA Integrative Orthologypost-embryonic development AT4G39100
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G39100
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT4G39100
GO:0006325
ISO
PLAZA Integrative Orthologychromatin organization AT4G39100
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT4G39100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
InterProchromatin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G39100
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT4G39100
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G39100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G39100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001025 Bromo adjacent homology (BAH) domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR043151 Bromo adjacent homology (BAH) domain superfamily
IPR019787 Zinc finger, PHD-finger
IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
Mapman id Description
12.3.6.2.1 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (SHL/EBS)