Gene: AT4G04260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G04260
  • Transcript Identifier AT4G04260.2
  • Gene Type Coding gene
  • Location Chr4 : 2054330-2055849 : positive

Gene Family Information

  • ID HOM05D001347
  • #Genes/#Species 467/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G04260.2
  • uniprot F4JGB7

Descriptions

  • Description Bromo-adjacent homology (BAH) domain-containing protein
  • Computational description Bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G22140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0006325
ISS
Gene Ontologychromatin organization
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated
GO:0035067
ISS
Gene Ontologynegative regulation of histone acetylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISS
Gene Ontologytranscription cis-regulatory region binding
GO:0003682
IEA
Gene Ontologychromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0035064
ISS
Gene Ontologymethylated histone binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISS, ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR001025 Bromo adjacent homology (BAH) domain
IPR043151 Bromo adjacent homology (BAH) domain superfamily
Mapman id Description
12.3.6.2.1 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (SHL/EBS)