Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35960 Brassica napus
A03p26480 Brassica napus
A04p12740 Brassica napus
A04p21080 Brassica napus
A06p40490 Brassica napus
A07p18340 Brassica napus
Aa31LG2G4590 Aethionema arabicum
Aa31LG4G14060 Aethionema arabicum
Aa31LG4G14080 Aethionema arabicum
Aa31LG5G8270 Aethionema arabicum
Aa31LG9G1590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4891 Anthoceros agrestis
Actinidia22577 Actinidia chinensis
Actinidia31279 Actinidia chinensis
Actinidia38027 Actinidia chinensis
Ah.08g210760 Amaranthus hybridus
Ah.08g215960 Amaranthus hybridus
Ah.15g091030 Amaranthus hybridus
Ah.15g095640 Amaranthus hybridus
AL352U10010 Arabidopsis lyrata
AL4G22580 Arabidopsis lyrata
AL4G22590 Arabidopsis lyrata
AL4G22610 Arabidopsis lyrata
AL5G18130 Arabidopsis lyrata
AL5G22720 Arabidopsis lyrata
AL7G49960 Arabidopsis lyrata
Aqoxy4G02836 Aquilegia oxysepala
Aqoxy6G02610 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65LFFQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7DR0YX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8LR0MX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J10IA2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4IZU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S3VH2F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WP52TP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YSB5JQ Arachis hypogaea
AT2G27710 Arabidopsis thaliana
AT2G27720 Arabidopsis thaliana
AT3G28500 Arabidopsis thaliana
AT3G44590 Arabidopsis thaliana
AT5G40040 Arabidopsis thaliana
ATR1136G029 Amborella trichopoda
Atru.chr1.3311 Acer truncatum
Atru.chr13.1903 Acer truncatum
Atru.chr3.3337 Acer truncatum
Atru.chr8.1597 Acer truncatum
AUR62009794 Chenopodium quinoa
AUR62028575 Chenopodium quinoa
BcaB01g03082 Brassica carinata
BcaB01g03083 Brassica carinata
BcaB02g10109 Brassica carinata
BcaB02g10728 Brassica carinata
BcaB06g27406 Brassica carinata
BcaB06g28163 Brassica carinata
BcaB07g30127 Brassica carinata
BcaC01g04954 Brassica carinata
BcaC02g08236 Brassica carinata
BcaC02g10897 Brassica carinata
BcaC02g10900 Brassica carinata
BcaC03g17519 Brassica carinata
BcaC04g23873 Brassica carinata
BcaC06g30913 Brassica carinata
BcaC06g33620 Brassica carinata
BolC2t11542H Brassica oleracea
BolC3t15519H Brassica oleracea
BolC4t23887H Brassica oleracea
BolC4t27224H Brassica oleracea
BolC7t44267H Brassica oleracea
BolC9t53316H Brassica oleracea
BraA02t08596Z Brassica rapa
BraA03t11861Z Brassica rapa
BraA04t16933Z Brassica rapa
BraA04t17677Z Brassica rapa
BraA06t26967Z Brassica rapa
BraA07t29550Z Brassica rapa
BraA09t36004Z Brassica rapa
C02p54810 Brassica napus
C03p31760 Brassica napus
C04p23940 Brassica napus
C04p56890 Brassica napus
C07p37540 Brassica napus
C09p03890 Brassica napus
CAN.G353.3 Capsicum annuum
CAN.G763.12 Capsicum annuum
CAN.G772.3 Capsicum annuum
CAN.G919.15 Capsicum annuum
CANSAT11G0891 Cannabis sativa
CANSAT21G1859 Cannabis sativa
CANSAT35G1035 Cannabis sativa
CANSAT35G1609 Cannabis sativa
CARHR120390 Cardamine hirsuta
CARHR151590 Cardamine hirsuta
CARHR262060 Cardamine hirsuta
CARHR286820 Cardamine hirsuta
Carub.0004s0846 Capsella rubella
Carub.0004s0848 Capsella rubella
Carub.0005s0703 Capsella rubella
Carub.0005s1022 Capsella rubella
Carub.0007s3562 Capsella rubella
Carub.0015s0021 Capsella rubella
Ca_01668_v3 Cicer arietinum L.
Ca_05134_v3 Cicer arietinum L.
Ca_11637_v3 Cicer arietinum L.
Ca_30004_v3 Cicer arietinum L.
CBR_g49008 Chara braunii
CBR_g49655 Chara braunii
CBR_g53700 Chara braunii
Cc00_g29710 Coffea canephora
Cc01_g09540 Coffea canephora
Cc02_g30200 Coffea canephora
Cc06_g05500 Coffea canephora
Cc11_g16520 Coffea canephora
CDE02G3775 Ceratophyllum demersum
CDE08G0626 Ceratophyllum demersum
CDE08G0744 Ceratophyllum demersum
CDE09G0537 Ceratophyllum demersum
Cfa010059 Carpinus fangiana
Cfa011249 Carpinus fangiana
Ciclev10010316m.g Citrus clementina
Ciclev10013051m.g Citrus clementina
Ciclev10029621m.g Citrus clementina
CiPaw.09G010500 Carya illinoinensis
CiPaw.13G038000 Carya illinoinensis
CiPaw.13G139100 Carya illinoinensis
CiPaw.14G030100 Carya illinoinensis
CiPaw.14G102300 Carya illinoinensis
ClCG02G022040 Citrullus lanatus
ClCG04G009880 Citrullus lanatus
ClCG05G021690 Citrullus lanatus
COL.COLO4_06998 Corchorus olitorius
COL.COLO4_19938 Corchorus olitorius
COL.COLO4_28827 Corchorus olitorius
COL.COLO4_29786 Corchorus olitorius
Cpa.g.sc31.11 Carica papaya
Cpa.g.sc31.7 Carica papaya
Cpa.g.sc31.88 Carica papaya
Cpa.g.sc32.136 Carica papaya
Cpa.g.sc5.55 Carica papaya
Cre02.g143050 Chlamydomonas reinhardtii
CsaV3_5G035580 Cucumis sativus L.
CsaV3_6G014880 Cucumis sativus L.
CsaV3_6G040520 Cucumis sativus L.
CsaV3_6G040530 Cucumis sativus L.
CsaV3_7G016210 Cucumis sativus L.
CSS0004584 Camellia sinensis var. sinensis
CSS0029357 Camellia sinensis var. sinensis
CSS0045416 Camellia sinensis var. sinensis
DCAR_006149 Daucus carota
DCAR_010934 Daucus carota
DCAR_012179 Daucus carota
DCAR_012180 Daucus carota
DCAR_013374 Daucus carota
DCAR_031643 Daucus carota
Dinv42576 Davidia involucrata
Duzib093G0334 Durio zibethinus
Duzib093G0483 Durio zibethinus
Duzib093G1815 Durio zibethinus
Duzib106G1188 Durio zibethinus
Duzib114G0377 Durio zibethinus
Duzib128G1758 Durio zibethinus
Duzib150G0915 Durio zibethinus
Duzib168G1326 Durio zibethinus
Duzib170G0664 Durio zibethinus
ECA233G0022 Erigeron canadensis
ECA238G0252 Erigeron canadensis
EL10Ac7g15791 Beta vulgaris
EL10Ac7g16955 Beta vulgaris
Eucgr.A00378 Eucalyptus grandis
Eucgr.J00465 Eucalyptus grandis
FAN02G0391 Fragaria x ananassa
FAN02G1186 Fragaria x ananassa
FAN05G0054 Fragaria x ananassa
FAN05G0556 Fragaria x ananassa
FAN05G5031 Fragaria x ananassa
FAN09G2557 Fragaria x ananassa
FAN09G3602 Fragaria x ananassa
FAN11G1769 Fragaria x ananassa
FAN11G2693 Fragaria x ananassa
FAN12G1019 Fragaria x ananassa
FAN12G1127 Fragaria x ananassa
FAN14G3598 Fragaria x ananassa
FAN16G2254 Fragaria x ananassa
FAN17G2378 Fragaria x ananassa
FAN21G1574 Fragaria x ananassa
FAN21G2077 Fragaria x ananassa
FAN21G2313 Fragaria x ananassa
FAN21G3909 Fragaria x ananassa
FAN22G1536 Fragaria x ananassa
FAN25G2073 Fragaria x ananassa
FAN25G2384 Fragaria x ananassa
FAN25G3704 Fragaria x ananassa
FvH4_3g01910 Fragaria vesca
FvH4_3g12420 Fragaria vesca
FvH4_3g19860 Fragaria vesca
FvH4_3g19900 Fragaria vesca
FvH4_4g01570 Fragaria vesca
FvH4_4g12610 Fragaria vesca
FvH4_6g18210 Fragaria vesca
FvH4_6g25270 Fragaria vesca
Glyma.03G193100 Glycine max
Glyma.10G067800 Glycine max
Glyma.12G182800 Glycine max
Glyma.13G318200 Glycine max
Glyma.19G193200 Glycine max
Glyma.U031221 Glycine max
Gohir.A01G207700 Gossypium hirsutum
Gohir.A02G126400 Gossypium hirsutum
Gohir.A04G064900 Gossypium hirsutum
Gohir.A05G082600 Gossypium hirsutum
Gohir.A07G108600 Gossypium hirsutum
Gohir.A07G108760 Gossypium hirsutum
Gohir.A08G004200 Gossypium hirsutum
Gohir.A08G004300 Gossypium hirsutum
Gohir.A09G138000 Gossypium hirsutum
Gohir.D01G197100 Gossypium hirsutum
Gohir.D04G102300 Gossypium hirsutum
Gohir.D05G085500 Gossypium hirsutum
Gohir.D07G112400 Gossypium hirsutum
Gohir.D08G014500 Gossypium hirsutum
Gohir.D08G014600 Gossypium hirsutum
Gohir.D09G136600 Gossypium hirsutum
Gorai.001G120800 Gossypium raimondii
Gorai.002G241200 Gossypium raimondii
Gorai.004G008900 Gossypium raimondii
Gorai.004G009000 Gossypium raimondii
Gorai.006G156700 Gossypium raimondii
Gorai.009G087300 Gossypium raimondii
Gorai.009G405600 Gossypium raimondii
GSVIVG01026267001 Vitis vinifera
GSVIVG01031366001 Vitis vinifera
GSVIVG01033814001 Vitis vinifera
GSVIVG01034757001 Vitis vinifera
HanXRQChr07g0197831 Helianthus annuus
HanXRQChr11g0345891 Helianthus annuus
HanXRQChr11g0346751 Helianthus annuus
HanXRQChr13g0397041 Helianthus annuus
HanXRQChr13g0397051 Helianthus annuus
HanXRQChr14g0451681 Helianthus annuus
Haze_02579 Corylus avellana
Haze_05594 Corylus avellana
Haze_19567 Corylus avellana
Haze_23426 Corylus avellana
Hma1.2p1_0084F.1_g043430 Hydrangea macrophylla
Hma1.2p1_0305F.1_g119450 Hydrangea macrophylla
HPP92_021399 Vanilla planifolia
HPP92_024229 Vanilla planifolia
HPP92_024252 Vanilla planifolia
Hund04023 Selenicereus undatus
Hund18663 Selenicereus undatus
Hund18737 Selenicereus undatus
Hund19963 Selenicereus undatus
Lalb_Chr02g0155081 Lupinus albus
Lalb_Chr03g0027981 Lupinus albus
Lalb_Chr06g0173291 Lupinus albus
Lalb_Chr14g0374121 Lupinus albus
Lalb_Chr19g0136671 Lupinus albus
Lalb_Chr21g0315481 Lupinus albus
Lalb_Chr22g0350661 Lupinus albus
Lalb_Chr24g0395221 Lupinus albus
Lj1g0012197 Lotus japonicus
Lj2g0006876 Lotus japonicus
Lj2g0010321 Lotus japonicus
Lj3g0018750 Lotus japonicus
Lj5g0022317 Lotus japonicus
Lsat_1_v5_gn_1_62040 Lactuca sativa
Lsat_1_v5_gn_2_95861 Lactuca sativa
Lsat_1_v5_gn_3_37341 Lactuca sativa
Lsat_1_v5_gn_6_39761 Lactuca sativa
Manes.04G006200 Manihot esculenta
Manes.08G023132 Manihot esculenta
Manes.09G058622 Manihot esculenta
Manes.09G058900 Manihot esculenta
Manes.11G159600 Manihot esculenta
Mapoly0001s0201 Marchantia polymorpha
Mapoly0036s0060 Marchantia polymorpha
Mapoly0043s0018 Marchantia polymorpha
MBI10_g36378_MAGBIO Magnolia biondii
MBI14_g21456_MAGBIO Magnolia biondii
MBI17_g38599_MAGBIO Magnolia biondii
MCO03G073 Micromonas commoda
MD03G1138800 Malus domestica
MD09G1183400 Malus domestica
MD09G1269400 Malus domestica
MD10G1207100 Malus domestica
MD11G1160300 Malus domestica
MD12G1022000 Malus domestica
MD14G1018800 Malus domestica
MD14G1180800 Malus domestica
MD15G1149800 Malus domestica
Medtr0227s0020 Medicago truncatula
Medtr1g060600 Medicago truncatula
Medtr2g085085 Medicago truncatula
Medtr2g085105 Medicago truncatula
MELO3C012359.2 Cucumis melo
MELO3C021436.2 Cucumis melo
MELO3C024528.2 Cucumis melo
Migut.J00969 Erythranthe guttata
Migut.N01031 Erythranthe guttata
Migut.N02502 Erythranthe guttata
MSTRG.12363 Avicennia marina
MSTRG.17715 Avicennia marina
MSTRG.18742 Avicennia marina
Nitab4.5_0001901g0020 Nicotiana tabacum
Nitab4.5_0002008g0020 Nicotiana tabacum
Nitab4.5_0002320g0040 Nicotiana tabacum
Nitab4.5_0002724g0010 Nicotiana tabacum
Nitab4.5_0003393g0080 Nicotiana tabacum
Nitab4.5_0003532g0070 Nicotiana tabacum
Nitab4.5_0004240g0070 Nicotiana tabacum
Nitab4.5_0005459g0010 Nicotiana tabacum
Nn2g14069 Nelumbo nucifera
Nn3g20663 Nelumbo nucifera
Nn6g34997 Nelumbo nucifera
Oeu008111.1 Olea europaea
Oeu018734.1 Olea europaea
Oeu026186.1 Olea europaea
Oeu035546.1 Olea europaea
Oeu058266.1 Olea europaea
Oeu058274.1 Olea europaea
Os01g0191100 Oryza sativa ssp. japonica
Os02g0529700 Oryza sativa ssp. japonica
Os05g0445500 Oryza sativa ssp. japonica
Os07g0251301 Oryza sativa ssp. japonica
Os07g0470300 Oryza sativa ssp. japonica
Os08g0250300 Oryza sativa ssp. japonica
Peaxi162Scf00088g00138 Petunia axillaris
Peaxi162Scf00091g01816 Petunia axillaris
Peaxi162Scf00384g00018 Petunia axillaris
Peaxi162Scf00384g00019 Petunia axillaris
Peaxi162Scf00401g00037 Petunia axillaris
Peaxi162Scf00544g01010 Petunia axillaris
Peaxi162Scf00757g00221 Petunia axillaris
Peaxi162Scf01192g00314 Petunia axillaris
PGR102G1637 Punica granatum
PGR119G1143 Punica granatum
PGR142G2578 Punica granatum
PGSC0003DMG400007119 Solanum tuberosum
PGSC0003DMG400007410 Solanum tuberosum
PGSC0003DMG400011194 Solanum tuberosum
PGSC0003DMG400011702 Solanum tuberosum
PGSC0003DMG400034769 Solanum tuberosum
Phvul.001G188201 Phaseolus vulgaris
Phvul.005G126000 Phaseolus vulgaris
Phvul.007G230200 Phaseolus vulgaris
Potri.004G185800 Populus trichocarpa
Potri.009G146200 Populus trichocarpa
Potri.010G236400 Populus trichocarpa
Pp3c10_2900 Physcomitrium patens
Pp3c14_7080 Physcomitrium patens
Pp3c1_27060 Physcomitrium patens
Pp3c2_15480 Physcomitrium patens
Pp3c6_20310 Physcomitrium patens
Prupe.6G123800 Prunus persica
Prupe.7G114700 Prunus persica
Psat4g198880 Pisum sativum
Psat5g256040 Pisum sativum
Psat6g083360 Pisum sativum
PSO063G1744 Papaver somniferum
PSO063G2573 Papaver somniferum
PSO063G5007 Papaver somniferum
PSO250G0034 Papaver somniferum
PSO339G4793 Papaver somniferum
PSO384G0495 Papaver somniferum
PSO384G2171 Papaver somniferum
PSO832G0803 Papaver somniferum
PSO832G1412 Papaver somniferum
PSO832G3545 Papaver somniferum
QL01p013264 Quercus lobata
QL04p042882 Quercus lobata
QL07p039803 Quercus lobata
QL07p040328 Quercus lobata
QL07p040372 Quercus lobata
RcHm_v2.0_Chr3g0472541 Rosa chinensis
RcHm_v2.0_Chr4g0405631 Rosa chinensis
RcHm_v2.0_Chr5g0001741 Rosa chinensis
RcHm_v2.0_Chr5g0002781 Rosa chinensis
RcHm_v2.0_Chr5g0002791 Rosa chinensis
RcHm_v2.0_Chr5g0010691 Rosa chinensis
RcHm_v2.0_Chr5g0033571 Rosa chinensis
RcHm_v2.0_Chr5g0043421 Rosa chinensis
RcHm_v2.0_Chr5g0043451 Rosa chinensis
RcHm_v2.0_Chr6g0283321 Rosa chinensis
RhsimUnG0166700 Rhododendron simsii
Sabra04G0125100 Salix brachista
Sabra09G0113100 Salix brachista
Sabra09G0115500 Salix brachista
Sabra10G0183500 Salix brachista
SalBow3G2476 Salvia bowleyana
SalBow3G3690 Salvia bowleyana
SalBow6G6476 Salvia bowleyana
Sc02g0001030 Simmondsia chinensis
Sc07g0005440 Simmondsia chinensis
Sc12g0004310 Simmondsia chinensis
Sc20g0006140 Simmondsia chinensis
Sed0000026 Sechium edule
Sed0000379 Sechium edule
Sed0002064 Sechium edule
Sed0008588 Sechium edule
Sed0015138 Sechium edule
Sed0018049 Sechium edule
Sed0020028 Sechium edule
SEGI_20707 Sequoiadendron giganteum
SEGI_29307 Sequoiadendron giganteum
SEGI_35886 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29925 Striga asiatica
SGA_v2.0_scaffold17G07905 Striga asiatica
SGA_v2.0_scaffold35G14074 Striga asiatica
SGA_v2.0_scaffold83G26403 Striga asiatica
SMO367G1284 Selaginella moellendorffii
Solyc01g009447.1 Solanum lycopersicum
Solyc06g074430.4 Solanum lycopersicum
Solyc07g007880.1 Solanum lycopersicum
Solyc11g067100.2 Solanum lycopersicum
Sopen01g004990 Solanum pennellii
Sopen06g030910 Solanum pennellii
Sopen07g003780 Solanum pennellii
Sopen11g026810 Solanum pennellii
Sp2g17260 Schrenkiella parvula
Sp4g10490 Schrenkiella parvula
Sp4g10510 Schrenkiella parvula
Sp5g16620 Schrenkiella parvula
Sp7g02060 Schrenkiella parvula
TAR362G0505 Trochodendron aralioides
TAR376G1231 Trochodendron aralioides
TAR485G0004 Trochodendron aralioides
TAR623G0961 Trochodendron aralioides
TAR626G0493 Trochodendron aralioides
TAR629G0653 Trochodendron aralioides
TAR633G0946 Trochodendron aralioides
TAR633G1785 Trochodendron aralioides
TAR636G3209 Trochodendron aralioides
TAR636G3685 Trochodendron aralioides
THA.LOC104799732 Tarenaya hassleriana
THA.LOC104800542 Tarenaya hassleriana
THA.LOC104814793 Tarenaya hassleriana
THA.LOC104815729 Tarenaya hassleriana
Thecc.04G133500 Theobroma cacao
Thecc.05G085000 Theobroma cacao
Thecc.09G288100 Theobroma cacao
Thecc.09G288200 Theobroma cacao
Thhalv10002732m.g Eutrema salsugineum
Thhalv10005165m.g Eutrema salsugineum
Thhalv10017442m.g Eutrema salsugineum
Thhalv10023112m.g Eutrema salsugineum
Thhalv10023766m.g Eutrema salsugineum
Thhalv10028149m.g Eutrema salsugineum
TPR.G23792 Trifolium pratense
TPR.G2695 Trifolium pratense
TPR.G35437 Trifolium pratense
TWI31G1129 Tripterygium wilfordii
TWI53G1165 Tripterygium wilfordii
TWI75G0663 Tripterygium wilfordii
TWI79G0896 Tripterygium wilfordii
TWI79G1605 Tripterygium wilfordii
unitig_0.g1483 Utricularia gibba
unitig_736.g22398 Utricularia gibba
unitig_746.g26605 Utricularia gibba
unitig_747.g21950 Utricularia gibba
unitig_899.g15370 Utricularia gibba
vmacro04485 Vaccinium macrocarpon
VMungo0720G0873 Vigna mungo
VMungo1080G0902 Vigna mungo
VMungo1383G1397 Vigna mungo
Zm00001eb066820 Zea mays
Zm00001eb304440 Zea mays
Zm00001eb304470 Zea mays
Zm00001eb344440 Zea mays
Zm00001eb348240 Zea mays
Zm00001eb433350 Zea mays

User provided reference genes

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