Gene: AT2G27710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G27710
  • Transcript Identifier AT2G27710.1
  • Gene Type Coding gene
  • Location Chr2 : 11816929-11817670 : positive

Gene Family Information

  • ID HOM05D001341
  • #Genes/#Species 469/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G27710.1
  • uniprot Q9SLF7

Descriptions

  • Description 60S acidic ribosomal protein family
  • Computational description 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1); Has 1875 Blast hits to 1874 proteins in 360 species: Archae - 31; Bacteria - 1; Metazoa - 679; Fungi - 442; Plants - 437; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002182
IEA
Gene Ontologycytoplasmic translational elongation
GO:0002182
IEA
InterProcytoplasmic translational elongation
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0009409
IEP
Gene Ontologyresponse to cold1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0044877
ISO
PLAZA Integrative Orthologyprotein-containing complex binding Zm00001eb348240
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022625
IEA
Gene Ontologycytosolic large ribosomal subunit
GO:0022625
IEA
InterProcytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005634
IDA
GOA Databasenucleus
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome3
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast4
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus5
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005777
HDA
Gene Ontologyperoxisome6
GO:0099503
HDA
Gene Ontologysecretory vesicle7
GO:0005794
RCA
Gene OntologyGolgi apparatus8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044076 Ribosomal protein P2
IPR038716 Ribosomal protein P1/P2, N-terminal domain
Mapman id Description
17.1.2.1.47 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP2