Gene: AT2G27720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G27720
  • Transcript Identifier AT2G27720.1
  • Gene Type Coding gene
  • Location Chr2 : 11818696-11819370 : positive

Gene Family Information

  • ID HOM05D001341
  • #Genes/#Species 469/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G27720.1
  • uniprot P51407

Descriptions

  • Description 60S acidic ribosomal protein family
  • Computational description 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27710.4); Has 1976 Blast hits to 1975 proteins in 364 species: Archae - 32; Bacteria - 0; Metazoa - 785; Fungi - 446; Plants - 440; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G27710
GO:0002182
IEA
Gene Ontologycytoplasmic translational elongation
GO:0002182
IEA
InterProcytoplasmic translational elongation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044877
ISO
PLAZA Integrative Orthologyprotein-containing complex binding Zm00001eb348240
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G27710
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G27710
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G27710
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G27710
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G27710
GO:0022625
IEA
Gene Ontologycytosolic large ribosomal subunit
GO:0022625
IEA
InterProcytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005777
HDA
Gene Ontologyperoxisome2
GO:0099503
HDA
Gene Ontologysecretory vesicle3
GO:0005794
RCA
Gene OntologyGolgi apparatus4
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0005634
HDA
Gene Ontologynucleus6
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038716 Ribosomal protein P1/P2, N-terminal domain
IPR044076 Ribosomal protein P2
Mapman id Description
17.1.2.1.47 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP2