Gene: Solyc11g067100.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g067100.2
- Transcript Identifier Solyc11g067100.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 50873112-50874666 : negative
Gene Family Information
- ID HOM05D001341
- #Genes/#Species 469/97
- Phylogenetic origin
- ID ORTHO05D001181
- #Genes/#Species 464/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc11g067100.2.1
- uniprot A0A3Q7JP71
- gene_id Solyc11g067100
Descriptions
- Description 60S acidic ribosomal protein family (AHRD V3.3 *-* F4IGR3_ARATH),Pfam:PF00428
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002182 | IEA | GOA Database | cytoplasmic translational elongation | |
| GO:0002182 | IEA | InterPro | cytoplasmic translational elongation | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT2G27710 |
| GO:0006414 | IEA | GOA Database | translational elongation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044877 | ISO | PLAZA Integrative Orthology | protein-containing complex binding | Zm00001eb348240 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G27710 |
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G27710 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT2G27710 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G27710 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G27710 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G27710 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT2G27710 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G27710 |
| GO:0022625 | IEA | GOA Database | cytosolic large ribosomal subunit | |
| GO:0022625 | IEA | InterPro | cytosolic large ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.2.1.47 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP2 |